Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- golgi 1
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G208000.2 | Wheat | plastid | 68.81 | 81.37 |
| TraesCS2A01G181400.1 | Wheat | plastid | 66.56 | 78.71 |
| TraesCS2A01G180800.1 | Wheat | nucleus, plastid | 58.84 | 69.85 |
| GSMUA_Achr6P24620_001 | Banana | nucleus | 50.8 | 59.4 |
| HORVU3Hr1G088590.6 | Barley | cytosol | 45.34 | 53.61 |
| HORVU4Hr1G068540.1 | Barley | cytosol, plastid | 40.19 | 50.2 |
| HORVU7Hr1G008760.1 | Barley | nucleus, plastid | 31.51 | 40.83 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G034110.1 | EnsemblPlantsGene:HORVU2Hr1G034110 | Gene3D:1.20.5.110 | InterPro:IPR000727 | InterPro:T_SNARE_dom | ncoils:Coil |
| PANTHER:PTHR19305 | PANTHER:PTHR19305:SF7 | PFscan:PS50192 | SEG:seg | SMART:SM00397 | SUPFAM:SSF58038 |
| UniParc:UPI00029559D7 | UniProt:M0UZ11 | MapMan:22.7.3.1 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:137282954..137285863
Molecular Weight (calculated)
34264.3 Da
IEP (calculated)
9.880
GRAVY (calculated)
-0.878
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFARQEGCP LQLSWKKRTS IPLPPTPVLP PSPEEAGGRQ ALPLLSGKMP VSSVPKPSSS KPNPFDSDSD SEFTSRPARA SSSSSVDPGT NGRYKNGFRD
101: SGGFDNQSVQ ELEGYVAYKA EETTQKVSVC LRLAENIRED ATNTLIALHK QGQQMNRTHE TAANIDQDLS RSETLLGSLG GFFSKTWKPK KTRQIKGPAV
201: ILRDDSFKRR ANHLEQREKL GLSSSPRGRS NPQKYPDPTN AMEKVQVEKD KQDNALSDLS DVLGQLKGMA LDMGSEIDRQ NKAMDGLQDD VEELNSRVKG
301: ANQRARRLLG K
101: SGGFDNQSVQ ELEGYVAYKA EETTQKVSVC LRLAENIRED ATNTLIALHK QGQQMNRTHE TAANIDQDLS RSETLLGSLG GFFSKTWKPK KTRQIKGPAV
201: ILRDDSFKRR ANHLEQREKL GLSSSPRGRS NPQKYPDPTN AMEKVQVEKD KQDNALSDLS DVLGQLKGMA LDMGSEIDRQ NKAMDGLQDD VEELNSRVKG
301: ANQRARRLLG K
001: MFGLRKSPAN LPKHNSVDLK SSKPNPFDSD DESDNKHTLN PSKRTTSEPS LADMTNPFGG ERVQKGDSSS SKQSLFSNSK YQYKNNFRDS GGIENQSVQE
101: LEGYAVYKAE ETTKSVQGCL KVAEDIRSDA TRTLVMLHDQ GEQITRTHHK AVEIDHDLSR GEKLLGSLGG MFSKTWKPKK TRPINGPVVT RDDSPTRRVN
201: HLEKREKLGL NSAPRGQSRT REPLPESADA YQRVEMEKAK QDDGLSDLSD ILGELKNMAV DMGSEIEKQN KGLDHLHDDV DELNFRVQQS NQRGRRLLGK
101: LEGYAVYKAE ETTKSVQGCL KVAEDIRSDA TRTLVMLHDQ GEQITRTHHK AVEIDHDLSR GEKLLGSLGG MFSKTWKPKK TRPINGPVVT RDDSPTRRVN
201: HLEKREKLGL NSAPRGQSRT REPLPESADA YQRVEMEKAK QDDGLSDLSD ILGELKNMAV DMGSEIEKQN KGLDHLHDDV DELNFRVQQS NQRGRRLLGK
Arabidopsis Description
SNAP33SNP33 [Source:UniProtKB/TrEMBL;Acc:A0A178UGR9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.