Factsheet for Bra009311.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra019760.1-P
Bra026974.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07880.1	Bra019760.1-P	AT1G12360.1	11591731
AT5G07880.1	Bra026974.1-P	AT1G12360.1	11591731

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69988	Canola	endoplasmic reticulum, extracellular	27.6	82.16
Bra005958.1-P	Field mustard	cytosol	22.99	80.14
Bra012978.1-P	Field mustard	nucleus	20.24	67.54
Bra029328.1-P	Field mustard	nucleus, plastid	19.45	67.35
AT5G07880.1	Thale cress	nucleus	16.5	66.93
Bra032989.1-P	Field mustard	nucleus	24.85	66.06
Bra013246.1-P	Field mustard	cytosol	19.45	65.13
PGSC0003DMT400063113	Potato	mitochondrion, nucleus	17.68	58.82
Solyc06g069570.2.1	Tomato	nucleus, plastid	17.49	58.17
KRH56857	Soybean	nucleus	16.99	57.67
PGSC0003DMT400083166	Potato	nucleus	17.29	57.52
GSMUA_Achr4P23350_001	Banana	nucleus	13.95	57.26
Bra026875.1-P	Field mustard	cytosol	9.14	56.71
KRH03094	Soybean	cytosol	16.6	56.33
VIT_17s0000g06860.t01	Wine grape	nucleus	16.8	56.07
KRH63266	Soybean	nucleus	15.52	54.3
KRH54642	Soybean	nucleus	15.32	53.42
Solyc03g115470.2.1	Tomato	nucleus	17.58	52.19
GSMUA_Achr5P01680_001	Banana	cytosol	13.95	51.45
Zm00001d019505_P001	Maize	nucleus	13.16	47.18
TraesCS7A01G049300.1	Wheat	nucleus, plastid	13.26	46.39
KXG34983	Sorghum	nucleus, plastid	12.97	45.52
TraesCS7D01G044400.1	Wheat	nucleus, plastid	13.56	45.25
TraesCS4A01G435200.1	Wheat	cytosol, plastid	13.46	43.77
Os02t0437200-01	Rice	plasma membrane	5.8	39.6
HORVU7Hr1G008760.1	Barley	nucleus, plastid	8.74	37.08

Protein Annotations

EnsemblPlants:Bra009311.1	EnsemblPlants:Bra009311.1-P	EnsemblPlantsGene:Bra009311	Gene3D:1.20.5.110	InterPro:IPR000727	InterPro:T_SNARE_dom
ncoils:Coil	PFscan:PS50192	SEG:seg	SMART:SM00397	SUPFAM:SSF58038	UniParc:UPI0002543991
UniProt:M4CYL4	MapMan:22.7.3.1	:	:	:	:

Description

AT5G07890 (E=1e-135) | myosin heavy chain-related

Coordinates

chrA10:-:16110189..16116451

Molecular Weight (calculated)

116775.0 Da

IEP (calculated)

6.330

GRAVY (calculated)

-0.619

Length

1018 amino acids

Sequence
(BLAST)

0001: MSISQFPPPA SPSPASSVRL WRPAAQRNLR NQWLKLSTCR KQWIAACSVG MSHANSLVNS YISQTFVPLM KFGVLSDMFD IKKKALNKLY KQQSSYRDKL
0101: LSSYKEMVAG VVEMVNVSRS MRCYMKSSSG SIIQFSCSKE DSDDAGDCGG ITVFSFWNIC WRFEKMAEEL VEMFKHEVML KRLLMMELVS LCAEVPQPAK
0201: LSWADELYQG EFDDLSKCSL YSMEVSEPIF PILKEDNLCI TSVSRTNQPT AEMLHIYLIT WAAEVNNDTH RKEEILAMMS SSSGSFSGRS SSACSSTSDC
0301: QNNSFDAEEL LQIGSRRMEL RKEKDLLRES QPHSIELVRS LELHTKSLSE TRLEDTARIR TMEKELLSCY KEIDYLRDQL IFRSKEVSYL NEHVHNLECK
0401: LAESGNLEEE VNCLREELCM SKSEHLLLLQ ELESKETELQ CSSLSAEKLE ETISSLTLES LCEIESMKLD ITALEQALGD AMKIQEESIE EKEYLKRIIK
0501: EIQFQSQEAE ENAKSFEKQN EDLRERIAAS EKSIKEFFQS AKGRFESENG QQPLNAECFF AELRHLFPVS SEVRDCFDAI IKRLELSRNI TLIDKMKGMG
0601: QQIQLHEDLV KRLKEELKEE KLKAKEEAEE LTQEMAELRY KMTCLLEEER KRRVCIEQAS LQRISELEAQ NFKFFRYRTP LIQVRRNCDL LSLAVSDSSL
0701: SLFARCSSSV LDRSRSPVWI TMFGLKKPLE RLSKHHKPSS SASASKSNPF DSDDDNKKHT LKPSNKISPQ PSLPTTKKNH SFNPFDDDDE VEVEKRLKPS
0801: FKNHFRDPGG VENQTVQELE SYAVYKSEET TRTVQGCLKV VQGIRSDATR TLVMLNEQGE KITRTHHKAV DIDHDLSRGE KILGSLGGIF SRTWKPKKTR
0901: SITGPVITRG ESSKRRVNHL ETREKLGLNH LPKPHSRTHE PLPESADAYQ KIEMEKAKQD DGLADLSDLL SELKNMAIDM GTEIERQNNG LDHLQDDVDE
1001: LNFRVKQSNQ RARRLLRK

Best Arabidopsis Sequence Match ( AT5G07890.3 )
(BLAST)

001: MSSSSGSFSG SSSSACSSRS DCENSFDVED LLQIGTTRRE LRKQKDLLRE SQPHSIELVR RLELHTKSLS ESRLEDTARI QMMEKELLNC YKEIDYLRDQ
101: LIFRSKEVNY LNEHLHDLEF KLAESRNLEE EVNSLRDELC MSKSEHLLLL QELESKEIEL QCSSLTLEKL EETISSLTLE SLCEIESMKL DITALEQALF
201: DAMKIQEESI QEKDQLKGII EESQFQSQRA KENVKYIEKQ NEDLREKFTA SEKSIKDFFQ STKERLESED EQPLNAMCFF AELSHVLPVS NEVRNCFDAI
301: MKKLELSQNV NLIDKVEGMG KQIHQHEDVV KQLKEELKQE KLKAKEEAED LTQEMAELRY KMTCLLDEER NRRVCIEQAS LQRISELEAQ IKRDVKKPAS
401: NEMLPLPGL

Arabidopsis Description

AT5G07890 protein [Source:UniProtKB/TrEMBL;Acc:B9DG86]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.