Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d050003_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid | 55.25 | 60.98 |
| Zm00001d005030_P009 | Maize | cytosol | 7.18 | 10.66 |
| Zm00001d004990_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid | 15.47 | 9.66 |
| Zm00001d005432_P003 | Maize | cytosol, mitochondrion | 7.18 | 9.56 |
| Zm00001d033737_P001 | Maize | cytosol | 4.42 | 9.09 |
| Zm00001d013036_P001 | Maize | plastid | 15.47 | 9.03 |
| Zm00001d052602_P001 | Maize | extracellular | 6.08 | 8.4 |
| Zm00001d010386_P002 | Maize | extracellular, peroxisome, plasma membrane | 6.63 | 8.28 |
| Solyc04g016350.1.1 | Tomato | nucleus, unclear | 10.5 | 7.6 |
| Solyc02g070340.2.1 | Tomato | mitochondrion | 11.05 | 7.58 |
| Solyc02g070330.2.1 | Tomato | mitochondrion | 11.05 | 7.58 |
| Solyc02g070320.2.1 | Tomato | nucleus, unclear | 11.05 | 7.58 |
| PGSC0003DMT400054543 | Potato | mitochondrion | 11.05 | 7.58 |
| KRH76010 | Soybean | endoplasmic reticulum | 11.05 | 7.58 |
| KRH65626 | Soybean | nucleus | 11.05 | 7.58 |
| Solyc06g007360.2.1 | Tomato | plastid | 11.05 | 7.58 |
| Solyc02g070350.2.1 | Tomato | nucleus, unclear | 11.05 | 7.58 |
| Solyc02g070360.2.1 | Tomato | nucleus | 11.05 | 7.58 |
| VIT_00s0252g00080.t01 | Wine grape | nucleus | 4.42 | 7.34 |
| AT2G17360.1 | Thale cress | mitochondrion | 10.5 | 7.28 |
| AT5G07090.1 | Thale cress | mitochondrion | 10.5 | 7.25 |
| AT5G58420.1 | Thale cress | mitochondrion | 10.5 | 7.25 |
| PGSC0003DMT400052955 | Potato | cytosol | 7.18 | 6.99 |
| Bra028708.1-P | Field mustard | cytosol | 9.94 | 6.87 |
| Zm00001d012878_P001 | Maize | plasma membrane | 9.94 | 6.79 |
| Bra005118.1-P | Field mustard | cytosol | 4.42 | 6.56 |
| VIT_08s0058g00390.t01 | Wine grape | mitochondrion, plastid | 9.94 | 6.38 |
| Bra020369.1-P | Field mustard | cytosol | 10.5 | 6.31 |
| VIT_06s0004g07150.t01 | Wine grape | cytosol | 10.5 | 6.29 |
| Bra005923.1-P | Field mustard | cytosol | 9.39 | 6.09 |
| Zm00001d050071_P001 | Maize | endoplasmic reticulum, extracellular | 3.87 | 6.03 |
| Zm00001d031460_P001 | Maize | cytosol | 4.42 | 6.02 |
| Zm00001d053283_P002 | Maize | cytosol | 6.08 | 6.01 |
| Zm00001d015481_P001 | Maize | cytosol | 3.31 | 5.94 |
| Zm00001d009287_P001 | Maize | cytosol | 4.42 | 5.93 |
| Zm00001d041311_P002 | Maize | cytosol, extracellular, nucleus | 2.76 | 5.88 |
| Zm00001d015817_P002 | Maize | plastid | 8.84 | 5.82 |
| VIT_13s0067g01820.t01 | Wine grape | cytosol | 7.73 | 5.69 |
| Zm00001d035647_P001 | Maize | cytosol | 4.42 | 5.52 |
| Zm00001d009518_P001 | Maize | cytosol | 4.97 | 5.2 |
| Zm00001d004105_P001 | Maize | extracellular, plastid | 5.52 | 5.18 |
| Zm00001d037876_P001 | Maize | cytosol | 7.73 | 5.17 |
| Zm00001d030402_P001 | Maize | cytosol, plastid | 5.52 | 5.15 |
| Bra033109.1-P | Field mustard | cytosol | 3.31 | 5.13 |
| Zm00001d049253_P001 | Maize | extracellular | 6.08 | 5.09 |
| Zm00001d050845_P002 | Maize | cytosol | 5.52 | 5.08 |
| Zm00001d019693_P001 | Maize | cytosol, plastid | 4.97 | 4.97 |
| Zm00001d005247_P001 | Maize | mitochondrion | 3.87 | 4.9 |
| Zm00001d034790_P001 | Maize | peroxisome | 6.63 | 4.86 |
| Zm00001d006068_P001 | Maize | cytosol | 3.31 | 4.72 |
| CDY36197 | Canola | cytosol | 3.31 | 4.65 |
| CDY00352 | Canola | cytosol | 3.31 | 4.62 |
| Zm00001d037427_P001 | Maize | extracellular | 3.31 | 4.44 |
| Zm00001d019486_P001 | Maize | cytosol | 4.97 | 4.39 |
| Zm00001d036575_P001 | Maize | mitochondrion | 4.97 | 4.37 |
| Zm00001d045775_P001 | Maize | cytosol | 2.21 | 4.17 |
| Zm00001d009343_P001 | Maize | mitochondrion | 4.42 | 4.17 |
| Zm00001d031575_P001 | Maize | extracellular | 3.31 | 4.14 |
| Zm00001d050009_P001 | Maize | plastid | 2.21 | 4.08 |
| Zm00001d015857_P002 | Maize | cytosol | 2.76 | 3.97 |
| Zm00001d051261_P001 | Maize | cytosol | 4.42 | 3.88 |
| Zm00001d004880_P001 | Maize | cytosol | 2.21 | 3.74 |
| Zm00001d035215_P001 | Maize | cytosol | 1.66 | 3.7 |
| Zm00001d019999_P001 | Maize | cytosol | 6.08 | 3.57 |
| Zm00001d030502_P001 | Maize | cytosol | 2.76 | 3.57 |
| Zm00001d016333_P001 | Maize | cytosol | 5.52 | 3.57 |
| Zm00001d046153_P001 | Maize | plastid | 6.08 | 3.48 |
| Zm00001d005608_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 14.92 | 3.44 |
| CDY71580 | Canola | cytosol | 2.21 | 3.39 |
| Zm00001d035807_P001 | Maize | cytosol | 6.63 | 3.36 |
| Zm00001d015887_P001 | Maize | cytosol | 2.76 | 3.33 |
| Zm00001d004587_P001 | Maize | plastid | 4.42 | 3.24 |
| CDY42359 | Canola | cytosol | 2.21 | 3.23 |
| Zm00001d008887_P002 | Maize | cytosol | 4.42 | 3.01 |
| Zm00001d033604_P001 | Maize | mitochondrion | 2.21 | 3.01 |
| Zm00001d045876_P002 | Maize | plasma membrane | 3.31 | 2.79 |
| Zm00001d000121_P001 | Maize | cytosol | 1.66 | 2.75 |
| Zm00001d045958_P001 | Maize | cytosol | 5.52 | 2.7 |
| Zm00001d024029_P001 | Maize | cytosol | 1.66 | 2.63 |
| Zm00001d045942_P001 | Maize | cytosol | 5.52 | 2.54 |
| Zm00001d010037_P001 | Maize | mitochondrion | 1.66 | 2.24 |
| Zm00001d036129_P001 | Maize | vacuole | 4.97 | 2.23 |
| Zm00001d045627_P001 | Maize | cytosol, plastid | 2.21 | 2.22 |
| Zm00001d049112_P001 | Maize | cytosol, peroxisome, plastid | 3.87 | 2.13 |
| Zm00001d042154_P021 | Maize | plastid | 5.52 | 2.11 |
| Zm00001d001770_P002 | Maize | plastid | 4.42 | 2.03 |
| Zm00001d019111_P002 | Maize | mitochondrion | 2.76 | 1.71 |
| Zm00001d019803_P001 | Maize | cytosol | 2.21 | 1.66 |
| Zm00001d021480_P001 | Maize | plasma membrane | 2.21 | 1.56 |
| Zm00001d031743_P001 | Maize | cytosol | 1.1 | 1.0 |
Protein Annotations
| EnsemblPlants:Zm00001d010387_P001 | EnsemblPlants:Zm00001d010387_T001 | EnsemblPlantsGene:Zm00001d010387 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | ProteinID:AQK93958.1 | SEG:seg | UniParc:UPI00084245EE | UniProt:A0A1D6FQQ8 |
| MapMan:35.2 | : | : | : | : | : |
Description
40S ribosomal protein S4-3
Coordinates
chr8:-:112571027..112572392
Molecular Weight (calculated)
19093.4 Da
IEP (calculated)
11.132
GRAVY (calculated)
0.262
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLLLHQPLL LLNASADHHL PWRRSSPISS CQGAVAELAL PQPWTSSGHP SPISPRPHPL AAAPSYSWWL SLLPWMLAVL PSLVLTSAPC VGWPVAPALG
101: LSSANSAPSI PARILLIGPA QIILMPDRGT TATAMKPHRV APALDVFDGI SQHVPTRSAA LVARTSNPAT VDVVPRASPM R
101: LSSANSAPSI PARILLIGPA QIILMPDRGT TATAMKPHRV APALDVFDGI SQHVPTRSAA LVARTSNPAT VDVVPRASPM R
001: MARFPTSPAP NLLLRLFSSN KRASSPTAAL LTGDFHLIRH FSAGTAARAV KDEKEPWWKE SMDKLRNIGI SAHIDSGKTT LTERVLFYTG RIHEIHEVRG
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVGDKRR ELIETVSEVD DVLAEKFLND EPVSAAELEE
301: AIRRATIAQK FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVGDKRR ELIETVSEVD DVLAEKFLND EPVSAAELEE
301: AIRRATIAQK FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE
Arabidopsis Description
MEFG2Elongation factor G-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4IW10]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.