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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d015481_P001 Maize cytosol 31.2 82.18
Zm00001d050071_P001 Maize endoplasmic reticulum, extracellular 31.2 71.55
Zm00001d006068_P001 Maize cytosol 33.83 70.87
Zm00001d033737_P001 Maize cytosol 22.93 69.32
Zm00001d035215_P001 Maize cytosol 20.68 67.9
Zm00001d031575_P001 Maize extracellular 36.09 66.21
Zm00001d005432_P003 Maize cytosol, mitochondrion 33.46 65.44
Zm00001d037427_P001 Maize extracellular 32.71 64.44
Zm00001d030502_P001 Maize cytosol 31.58 60.0
Zm00001d005247_P001 Maize mitochondrion 31.58 58.74
Zm00001d033604_P001 Maize mitochondrion 28.57 57.14
Zm00001d035647_P001 Maize cytosol 29.7 54.48
Zm00001d009518_P001 Maize cytosol 35.34 54.34
Zm00001d053283_P002 Maize cytosol 36.09 52.46
Zm00001d004880_P001 Maize cytosol 20.3 50.47
Zm00001d019693_P001 Maize cytosol, plastid 33.83 49.72
Zm00001d000121_P001 Maize cytosol 19.92 48.62
Zm00001d051261_P001 Maize cytosol 37.22 48.06
Zm00001d015857_P002 Maize cytosol 22.56 47.62
Zm00001d009343_P001 Maize mitochondrion 34.21 47.4
Zm00001d004105_P001 Maize extracellular, plastid 34.21 47.15
Zm00001d052602_P001 Maize extracellular 21.8 44.27
Zm00001d005030_P009 Maize cytosol 19.92 43.44
Zm00001d036575_P001 Maize mitochondrion 33.46 43.2
Zm00001d015887_P001 Maize cytosol 23.31 41.33
Zm00001d034790_P001 Maize peroxisome 38.35 41.3
Zm00001d045775_P001 Maize cytosol 14.66 40.62
GSMUA_Achr11P... Banana cytosol 37.59 40.49
GSMUA_Achr5P27000_001 Banana cytosol 37.22 40.08
Zm00001d024029_P001 Maize cytosol 16.92 39.47
EER90550 Sorghum cytosol 39.1 39.39
Zm00001d012878_P001 Maize plasma membrane 39.1 39.25
HORVU1Hr1G021720.1 Barley cytosol 39.1 39.25
TraesCS1A01G092900.1 Wheat golgi, nucleus 39.1 39.25
TraesCS1B01G120600.1 Wheat cytosol 39.1 39.25
TraesCS1D01G101600.1 Wheat cytosol 39.1 39.25
Zm00001d019486_P001 Maize cytosol 30.08 39.02
Os02t0105900-01 Rice nucleus 38.35 38.49
Zm00001d010386_P002 Maize extracellular, peroxisome, plasma membrane 20.3 37.24
Zm00001d015817_P002 Maize plastid 37.97 36.73
Zm00001d016333_P001 Maize cytosol 37.59 35.71
Zm00001d037876_P001 Maize cytosol 34.59 33.95
GSMUA_Achr3P23970_001 Banana cytosol 38.35 33.55
GSMUA_Achr3P00760_001 Banana cytosol, plasma membrane 38.35 33.12
GSMUA_Achr2P01640_001 Banana cytosol 37.97 32.48
Zm00001d030402_P001 Maize cytosol, plastid 23.68 32.47
Zm00001d010037_P001 Maize mitochondrion 15.41 30.6
Zm00001d009287_P001 Maize cytosol 15.41 30.37
Zm00001d031460_P001 Maize cytosol 14.66 29.32
Zm00001d019999_P001 Maize cytosol 33.46 28.9
Zm00001d050009_P001 Maize plastid 10.53 28.57
Zm00001d050845_P002 Maize cytosol 20.68 27.92
Zm00001d045958_P001 Maize cytosol 37.22 26.68
Zm00001d045627_P001 Maize cytosol, plastid 16.92 25.0
Zm00001d031743_P001 Maize cytosol 18.8 24.88
Zm00001d045942_P001 Maize cytosol 35.34 23.86
Zm00001d046153_P001 Maize plastid 25.56 21.52
Zm00001d042154_P021 Maize plastid 37.59 21.1
Zm00001d045876_P002 Maize plasma membrane 16.92 20.93
Zm00001d019803_P001 Maize cytosol 17.29 19.09
Zm00001d021480_P001 Maize plasma membrane 18.42 19.07
Zm00001d004990_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid 19.92 18.28
Zm00001d013036_P001 Maize plastid 20.68 17.74
Zm00001d001770_P002 Maize plastid 25.56 17.26
Zm00001d049112_P001 Maize cytosol, peroxisome, plastid 19.92 16.16
Zm00001d035807_P001 Maize cytosol 21.43 15.97
Zm00001d036129_P001 Maize vacuole 21.43 14.11
Zm00001d019111_P002 Maize mitochondrion 10.9 9.9
Zm00001d004587_P001 Maize plastid 8.27 8.91
Zm00001d005608_P001 Maize endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole 22.18 7.51
Zm00001d041311_P002 Maize cytosol, extracellular, nucleus 2.26 7.06
Zm00001d049253_P001 Maize extracellular 4.14 5.09
Zm00001d010387_P001 Maize plastid 3.01 4.42
Zm00001d050003_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid 2.63 4.27
Protein Annotations
MapMan:12.3.3.9.1MapMan:15.5.29Gene3D:2.30.30.30Gene3D:2.60.120.650UniProt:A0A1D6FGJ1ProteinID:AQK90965.1
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005840InterPro:IPR014722
InterPro:KOWPFAM:PD002667PFAM:PF00467PFAM:PF00900PANTHER:PTHR12549PANTHER:PTHR12549:SF17
InterPro:Rib_L2_dom2InterPro:Ribosomal_S4e_central_regionUniParc:UPI000844CF3BEnsemblPlantsGene:Zm00001d008887EnsemblPlants:Zm00001d008887_P002EnsemblPlants:Zm00001d008887_T002
SEG:seg:::::
Description
40S ribosomal protein S4-3
Coordinates
chr8:-:24106769..24111408
Molecular Weight (calculated)
30209.1 Da
IEP (calculated)
7.584
GRAVY (calculated)
-0.159
Length
266 amino acids
Sequence
(BLAST)
001: MSSNDVKKVV DGAVRASKEI MDEEMDEDVI VKVVDCSNQS EVDIELKQFI KGYSDGSKGG DDHLLMLKLK EWPRPIVLEA FLLCQRPEFI VNFPLVDFIH
101: PRWGLLNLAA KLPPDALQPE LGMKLLIAHG SHQELGKGDS MTNLMINMCD VVHMLMHATE VHYQCPKRFK LCKVRSVQFG QKGIPYLNTY DGRTIRYPDP
201: LIKANDTIKI DLETNKIMDF IKFDVRNVVM VTGGRNTGRV GVIKHREKHK GSFETIHVLL GVFCYV
Best Arabidopsis Sequence Match ( AT2G17360.1 )
(BLAST)
001: MARGLKKHLK RLNAPKHWML DKLGGAFAPK PSSGPHKSRE CLPLVLIIRN RLKYALTYRE VISILMQRHI QVDGKVRTDK TYPAGFMDVV SIPKTNENFR
101: LLYDTKGRFR LHSIKDEEAK FKLCKVRSIQ FGQKGIPYLN TYDGRTIRYP DPLIKPNDTI KLDLEENKIV EFIKFDVGNV VMVTGGRNRG RVGVIKNREK
201: HKGSFETIHI QDSTGHEFAT RLGNVYTIGK GTKPWVSLPK GKGIKLTIIE EARKRLSAQQ A
Arabidopsis Description
RPS4A40S ribosomal protein S4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93VH9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.