Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046153_P001 | Maize | plastid | 37.65 | 29.43 |
| Zm00001d045775_P001 | Maize | cytosol | 6.48 | 16.67 |
| GSMUA_Achr5P27000_001 | Banana | cytosol | 15.38 | 15.38 |
| GSMUA_Achr11P... | Banana | cytosol | 14.98 | 14.98 |
| Zm00001d004880_P001 | Maize | cytosol | 6.48 | 14.95 |
| Zm00001d035215_P001 | Maize | cytosol | 4.86 | 14.81 |
| HORVU1Hr1G021720.1 | Barley | cytosol | 15.79 | 14.72 |
| TraesCS1A01G092900.1 | Wheat | golgi, nucleus | 15.79 | 14.72 |
| TraesCS1B01G120600.1 | Wheat | cytosol | 15.79 | 14.72 |
| TraesCS1D01G101600.1 | Wheat | cytosol | 15.79 | 14.72 |
| Os02t0105900-01 | Rice | nucleus | 15.38 | 14.34 |
| Zm00001d000121_P001 | Maize | cytosol | 6.07 | 13.76 |
| EER90550 | Sorghum | cytosol | 14.57 | 13.64 |
| Zm00001d012878_P001 | Maize | plasma membrane | 14.57 | 13.58 |
| Zm00001d015857_P002 | Maize | cytosol | 6.88 | 13.49 |
| GSMUA_Achr3P23970_001 | Banana | cytosol | 16.19 | 13.16 |
| GSMUA_Achr3P00760_001 | Banana | cytosol, plasma membrane | 16.19 | 12.99 |
| Zm00001d030402_P001 | Maize | cytosol, plastid | 10.12 | 12.89 |
| GSMUA_Achr2P01640_001 | Banana | cytosol | 16.19 | 12.86 |
| Zm00001d015817_P002 | Maize | plastid | 14.17 | 12.73 |
| Zm00001d034790_P001 | Maize | peroxisome | 12.55 | 12.55 |
| Zm00001d050009_P001 | Maize | plastid | 4.86 | 12.24 |
| Zm00001d019693_P001 | Maize | cytosol, plastid | 8.91 | 12.15 |
| Zm00001d050071_P001 | Maize | endoplasmic reticulum, extracellular | 5.67 | 12.07 |
| Zm00001d031460_P001 | Maize | cytosol | 6.48 | 12.03 |
| Zm00001d015887_P001 | Maize | cytosol | 7.29 | 12.0 |
| Zm00001d004105_P001 | Maize | extracellular, plastid | 9.31 | 11.92 |
| Zm00001d015481_P001 | Maize | cytosol | 4.86 | 11.88 |
| Zm00001d005432_P003 | Maize | cytosol, mitochondrion | 6.48 | 11.76 |
| Zm00001d035647_P001 | Maize | cytosol | 6.88 | 11.72 |
| Zm00001d045627_P001 | Maize | cytosol, plastid | 8.5 | 11.67 |
| Zm00001d019486_P001 | Maize | cytosol | 8.91 | 10.73 |
| Zm00001d024029_P001 | Maize | cytosol | 4.86 | 10.53 |
| Zm00001d005247_P001 | Maize | mitochondrion | 6.07 | 10.49 |
| Zm00001d037427_P001 | Maize | extracellular | 5.67 | 10.37 |
| Zm00001d031575_P001 | Maize | extracellular | 6.07 | 10.34 |
| Zm00001d036575_P001 | Maize | mitochondrion | 8.5 | 10.19 |
| Zm00001d033604_P001 | Maize | mitochondrion | 5.26 | 9.77 |
| Zm00001d006068_P001 | Maize | cytosol | 4.86 | 9.45 |
| Zm00001d030502_P001 | Maize | cytosol | 5.26 | 9.29 |
| Zm00001d009518_P001 | Maize | cytosol | 6.48 | 9.25 |
| Zm00001d051261_P001 | Maize | cytosol | 7.69 | 9.22 |
| Zm00001d010037_P001 | Maize | mitochondrion | 4.86 | 8.96 |
| Zm00001d037876_P001 | Maize | cytosol | 9.31 | 8.49 |
| Zm00001d009343_P001 | Maize | mitochondrion | 6.48 | 8.33 |
| Zm00001d008887_P002 | Maize | cytosol | 8.91 | 8.27 |
| Zm00001d053283_P002 | Maize | cytosol | 6.07 | 8.2 |
| Zm00001d001770_P002 | Maize | plastid | 12.55 | 7.87 |
| Zm00001d031743_P001 | Maize | cytosol | 6.07 | 7.46 |
| Zm00001d019999_P001 | Maize | cytosol | 8.91 | 7.14 |
| Zm00001d041311_P002 | Maize | cytosol, extracellular, nucleus | 2.43 | 7.06 |
| Zm00001d021480_P001 | Maize | plasma membrane | 7.29 | 7.0 |
| Zm00001d045876_P002 | Maize | plasma membrane | 6.07 | 6.98 |
| Zm00001d016333_P001 | Maize | cytosol | 6.88 | 6.07 |
| Zm00001d049253_P001 | Maize | extracellular | 5.26 | 6.02 |
| Zm00001d019803_P001 | Maize | cytosol | 5.67 | 5.81 |
| Zm00001d033737_P001 | Maize | cytosol | 2.02 | 5.68 |
| Zm00001d045942_P001 | Maize | cytosol | 8.5 | 5.33 |
| Zm00001d045958_P001 | Maize | cytosol | 7.29 | 4.85 |
| Zm00001d052602_P001 | Maize | extracellular | 2.43 | 4.58 |
| Zm00001d010387_P001 | Maize | plastid | 3.24 | 4.42 |
| Zm00001d050003_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid | 2.83 | 4.27 |
| Zm00001d005030_P009 | Maize | cytosol | 2.02 | 4.1 |
| Zm00001d050845_P002 | Maize | cytosol | 3.24 | 4.06 |
| Zm00001d010386_P002 | Maize | extracellular, peroxisome, plasma membrane | 2.02 | 3.45 |
| Zm00001d035807_P001 | Maize | cytosol | 4.86 | 3.36 |
| Zm00001d004990_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid | 3.64 | 3.1 |
| Zm00001d009287_P001 | Maize | cytosol | 1.62 | 2.96 |
| Zm00001d042154_P021 | Maize | plastid | 5.67 | 2.95 |
| Zm00001d036129_P001 | Maize | vacuole | 4.45 | 2.72 |
| Zm00001d049112_P001 | Maize | cytosol, peroxisome, plastid | 3.24 | 2.44 |
| Zm00001d013036_P001 | Maize | plastid | 2.43 | 1.94 |
| Zm00001d019111_P002 | Maize | mitochondrion | 2.02 | 1.71 |
| Zm00001d005608_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 4.45 | 1.4 |
Protein Annotations
| EnsemblPlants:Zm00001d004587_P001 | EnsemblPlants:Zm00001d004587_T001 | EnsemblPlantsGene:Zm00001d004587 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF30 | ProteinID:ONM19250.1 | SEG:seg |
| UniParc:UPI00084344EC | UniProt:A0A1D6EGF6 | MapMan:35.2 | : | : | : |
Description
40S ribosomal protein S4-3
Coordinates
chr2:-:120212439..120214507
Molecular Weight (calculated)
26905.3 Da
IEP (calculated)
8.617
GRAVY (calculated)
-0.430
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKPPLPTSP CSGPTSSPSC CCVQPMPLPP SSSLQQPYHG CAPASLVSSP QPQRQTCRRP HVQLLHPPGS LRAPTRFARS DRSARRALPM PARERPLPSL
101: LLSIDAQVDA ELPAPPDGVV KHLELKSPCL SKEVIKGVRS CDARQVSEFL DSKSETDVDV DYNSLYSKED FLQGKKTGRD EKEVLKAIDY VHELSMRCPG
201: QSECSTLPKT LGSCVVFSGS VPLSKSFAQK VSSEARKTSI MVYSYIT
101: LLSIDAQVDA ELPAPPDGVV KHLELKSPCL SKEVIKGVRS CDARQVSEFL DSKSETDVDV DYNSLYSKED FLQGKKTGRD EKEVLKAIDY VHELSMRCPG
201: QSECSTLPKT LGSCVVFSGS VPLSKSFAQK VSSEARKTSI MVYSYIT
001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
Arabidopsis Description
SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.