Factsheet for Zm00001d033604_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005247_P001	Maize	mitochondrion	90.98	84.62
Zm00001d015481_P001	Maize	cytosol	55.64	73.27
Zm00001d035215_P001	Maize	cytosol	42.11	69.14
Zm00001d050071_P001	Maize	endoplasmic reticulum, extracellular	60.15	68.97
Zm00001d006068_P001	Maize	cytosol	55.64	58.27
Zm00001d037427_P001	Maize	extracellular	58.65	57.78
Zm00001d005432_P003	Maize	cytosol, mitochondrion	54.14	52.94
Zm00001d019693_P001	Maize	cytosol, plastid	68.42	50.28
Zm00001d031575_P001	Maize	extracellular	54.14	49.66
Zm00001d033737_P001	Maize	cytosol	32.33	48.86
Zm00001d000121_P001	Maize	cytosol	39.85	48.62
Zm00001d030502_P001	Maize	cytosol	51.13	48.57
Zm00001d009518_P001	Maize	cytosol	63.16	48.55
Zm00001d004105_P001	Maize	extracellular, plastid	69.92	48.19
Zm00001d024029_P001	Maize	cytosol	40.6	47.37
Zm00001d035647_P001	Maize	cytosol	48.87	44.83
Zm00001d004880_P001	Maize	cytosol	35.34	43.93
Zm00001d053283_P002	Maize	cytosol	57.14	41.53
Zm00001d015857_P002	Maize	cytosol	37.59	39.68
Zm00001d009343_P001	Maize	mitochondrion	55.64	38.54
Zm00001d045775_P001	Maize	cytosol	27.07	37.5
Zm00001d034790_P001	Maize	peroxisome	66.92	36.03
Zm00001d036575_P001	Maize	mitochondrion	55.64	35.92
Zm00001d005030_P009	Maize	cytosol	32.33	35.25
Zm00001d037876_P001	Maize	cytosol	71.43	35.06
Zm00001d051261_P001	Maize	cytosol	53.38	34.47
GSMUA_Achr11P...	Banana	cytosol	63.91	34.41
GSMUA_Achr5P27000_001	Banana	cytosol	63.91	34.41
EER90550	Sorghum	cytosol	67.67	34.09
Zm00001d015887_P001	Maize	cytosol	38.35	34.0
Zm00001d012878_P001	Maize	plasma membrane	67.67	33.96
TraesCS1B01G120600.1	Wheat	cytosol	65.41	32.83
HORVU1Hr1G021720.1	Barley	cytosol	65.41	32.83
TraesCS1A01G092900.1	Wheat	golgi, nucleus	65.41	32.83
TraesCS1D01G101600.1	Wheat	cytosol	65.41	32.83
Os02t0105900-01	Rice	nucleus	64.66	32.45
Zm00001d052602_P001	Maize	extracellular	31.58	32.06
Zm00001d019486_P001	Maize	cytosol	48.12	31.22
Zm00001d030402_P001	Maize	cytosol, plastid	45.11	30.93
Zm00001d019999_P001	Maize	cytosol	71.43	30.84
Zm00001d010386_P002	Maize	extracellular, peroxisome, plasma membrane	32.33	29.66
Zm00001d015817_P002	Maize	plastid	59.4	28.73
GSMUA_Achr3P23970_001	Banana	cytosol	65.41	28.62
Zm00001d008887_P002	Maize	cytosol	57.14	28.57
Zm00001d010037_P001	Maize	mitochondrion	28.57	28.36
GSMUA_Achr3P00760_001	Banana	cytosol, plasma membrane	64.66	27.92
Zm00001d031460_P001	Maize	cytosol	27.82	27.82
Zm00001d045627_P001	Maize	cytosol, plastid	37.59	27.78
GSMUA_Achr2P01640_001	Banana	cytosol	63.16	27.01
Zm00001d009287_P001	Maize	cytosol	27.07	26.67
Zm00001d045876_P002	Maize	plasma membrane	42.86	26.51
Zm00001d016333_P001	Maize	cytosol	55.64	26.43
Zm00001d031743_P001	Maize	cytosol	36.84	24.38
Zm00001d019803_P001	Maize	cytosol	42.11	23.24
Zm00001d050845_P002	Maize	cytosol	33.08	22.34
Zm00001d021480_P001	Maize	plasma membrane	42.86	22.18
Zm00001d045958_P001	Maize	cytosol	57.14	20.49
Zm00001d046153_P001	Maize	plastid	44.36	18.67
Zm00001d045942_P001	Maize	cytosol	54.14	18.27
Zm00001d004990_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid	33.83	15.52
Zm00001d042154_P021	Maize	plastid	54.14	15.19
Zm00001d013036_P001	Maize	plastid	35.34	15.16
Zm00001d049112_P001	Maize	cytosol, peroxisome, plastid	32.33	13.11
Zm00001d050009_P001	Maize	plastid	9.02	12.24
Zm00001d001770_P002	Maize	plastid	36.09	12.18
Zm00001d035807_P001	Maize	cytosol	32.33	12.04
Zm00001d036129_P001	Maize	vacuole	33.08	10.89
Zm00001d005608_P001	Maize	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	34.59	5.85
Zm00001d004587_P001	Maize	plastid	9.77	5.26
Zm00001d019111_P002	Maize	mitochondrion	11.28	5.12
Zm00001d041311_P002	Maize	cytosol, extracellular, nucleus	3.01	4.71
Zm00001d049253_P001	Maize	extracellular	4.51	2.78
Zm00001d050003_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid	3.01	2.44
Zm00001d010387_P001	Maize	plastid	3.01	2.21

Protein Annotations

Gene3D:2.30.30.30	Gene3D:2.40.50.740	MapMan:35.1	UniProt:A0A1D6L0C3	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
InterPro:IPR014722	InterPro:IPR038237	ProteinID:ONM08015.1	PFAM:PD002667	PFAM:PF00900	PANTHER:PTHR11581
PANTHER:PTHR11581:SF10	InterPro:Rib_L2_dom2	InterPro:Ribosomal_S4e	InterPro:Ribosomal_S4e_central_region	InterPro:Ribosomal_S4e_central_sf	UniParc:UPI000843F61A
EnsemblPlantsGene:Zm00001d033604	EnsemblPlants:Zm00001d033604_P001	EnsemblPlants:Zm00001d033604_T001	:	:	:

Description

40S ribosomal protein S4-3

Coordinates

chr1:+:268384281..268385710

Molecular Weight (calculated)

15180.6 Da

IEP (calculated)

9.705

GRAVY (calculated)

-0.233

Length

133 amino acids

Sequence
(BLAST)

001: MYLLMARSGL TRPTLLGSWM PFPSLRQTGT KRCLRLHPIR DEDAKFGQKG IPYLNTYDGH TIRYPDPLIK ANDTIKIDLE TNKIMDFFKF DVGNVVMVTG
101: GRNIGRVGEI KNWEKHKGSF EVIDVLLGAF CYV

Best Arabidopsis Sequence Match ( AT5G07090.2 )
(BLAST)

001: MLDKLGGAFA PKPSSGPHKS RECLPLVLII RNRLKYALTY REVISILMQR HIQVDGKVRT DKTYPAGFMD VVSIPKTNEN FRLLYDTKGR FRLHSIKDEE
101: AKFKLCKVRS IQFGQKGIPY LNTYDGRTIR YPDPLIKPND TIKLDLEENK IVEFIKFDVG NVVMVTGGRN RGRVGVIKNR EKHKGSFETI HIQDSTGHEF
201: ATRLGNVYTI GKGTKPWVSL PKGKGIKLTI IEEARKRLAS QQAA

Arabidopsis Description

RPS4B40S ribosomal protein S4-2 [Source:UniProtKB/Swiss-Prot;Acc:P49204]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.