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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d015481_P001 Maize cytosol 68.97 79.21
Zm00001d035215_P001 Maize cytosol 46.55 66.67
Zm00001d006068_P001 Maize cytosol 69.83 63.78
Zm00001d005247_P001 Maize mitochondrion 76.72 62.24
Zm00001d037427_P001 Maize extracellular 72.41 62.22
Zm00001d033604_P001 Maize mitochondrion 68.97 60.15
Zm00001d033737_P001 Maize cytosol 44.83 59.09
Zm00001d005432_P003 Maize cytosol, mitochondrion 68.97 58.82
Zm00001d031575_P001 Maize extracellular 69.83 55.86
Zm00001d009518_P001 Maize cytosol 74.14 49.71
Zm00001d035647_P001 Maize cytosol 62.07 49.66
Zm00001d030502_P001 Maize cytosol 56.03 46.43
Zm00001d019693_P001 Maize cytosol, plastid 69.83 44.75
Zm00001d004105_P001 Maize extracellular, plastid 74.14 44.56
Zm00001d000121_P001 Maize cytosol 41.38 44.04
Zm00001d053283_P002 Maize cytosol 68.1 43.17
Zm00001d004880_P001 Maize cytosol 38.79 42.06
Zm00001d009343_P001 Maize mitochondrion 68.1 41.15
Zm00001d005030_P009 Maize cytosol 42.24 40.16
Zm00001d036575_P001 Maize mitochondrion 70.69 39.81
Zm00001d015857_P002 Maize cytosol 42.24 38.89
Zm00001d051261_P001 Maize cytosol 68.97 38.84
Zm00001d052602_P001 Maize extracellular 43.1 38.17
Zm00001d045775_P001 Maize cytosol 30.17 36.46
Zm00001d019486_P001 Maize cytosol 61.21 34.63
GSMUA_Achr11P... Banana cytosol 73.28 34.41
GSMUA_Achr5P27000_001 Banana cytosol 73.28 34.41
Zm00001d010386_P002 Maize extracellular, peroxisome, plasma membrane 42.24 33.79
Zm00001d034790_P001 Maize peroxisome 71.55 33.6
Zm00001d015887_P001 Maize cytosol 43.1 33.33
Zm00001d024029_P001 Maize cytosol 32.76 33.33
TraesCS1B01G120600.1 Wheat cytosol 74.14 32.45
HORVU1Hr1G021720.1 Barley cytosol 74.14 32.45
Os02t0105900-01 Rice nucleus 74.14 32.45
TraesCS1A01G092900.1 Wheat golgi, nucleus 74.14 32.45
TraesCS1D01G101600.1 Wheat cytosol 74.14 32.45
EER90550 Sorghum cytosol 73.28 32.2
Zm00001d012878_P001 Maize plasma membrane 73.28 32.08
Zm00001d037876_P001 Maize cytosol 73.28 31.37
Zm00001d015817_P002 Maize plastid 74.14 31.27
Zm00001d008887_P002 Maize cytosol 71.55 31.2
Zm00001d010037_P001 Maize mitochondrion 33.62 29.1
Zm00001d016333_P001 Maize cytosol 69.83 28.93
GSMUA_Achr3P23970_001 Banana cytosol 74.14 28.29
GSMUA_Achr3P00760_001 Banana cytosol, plasma membrane 75.0 28.25
Zm00001d030402_P001 Maize cytosol, plastid 46.55 27.84
Zm00001d031460_P001 Maize cytosol 31.03 27.07
GSMUA_Achr2P01640_001 Banana cytosol 72.41 27.01
Zm00001d009287_P001 Maize cytosol 31.03 26.67
Zm00001d019999_P001 Maize cytosol 66.38 25.0
Zm00001d050845_P002 Maize cytosol 42.24 24.87
Zm00001d045627_P001 Maize cytosol, plastid 33.62 21.67
Zm00001d045958_P001 Maize cytosol 68.97 21.56
Zm00001d050009_P001 Maize plastid 17.24 20.41
Zm00001d046153_P001 Maize plastid 52.59 19.3
Zm00001d031743_P001 Maize cytosol 32.76 18.91
Zm00001d045942_P001 Maize cytosol 59.48 17.51
Zm00001d004990_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid 43.1 17.24
Zm00001d045876_P002 Maize plasma membrane 31.9 17.21
Zm00001d013036_P001 Maize plastid 43.1 16.13
Zm00001d042154_P021 Maize plastid 64.66 15.82
Zm00001d019803_P001 Maize cytosol 32.76 15.77
Zm00001d021480_P001 Maize plasma membrane 33.62 15.18
Zm00001d049112_P001 Maize cytosol, peroxisome, plastid 41.38 14.63
Zm00001d035807_P001 Maize cytosol 41.38 13.45
Zm00001d036129_P001 Maize vacuole 43.1 12.38
Zm00001d001770_P002 Maize plastid 40.52 11.93
Zm00001d019111_P002 Maize mitochondrion 21.55 8.53
Zm00001d005608_P001 Maize endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole 43.97 6.49
Zm00001d041311_P002 Maize cytosol, extracellular, nucleus 4.31 5.88
Zm00001d004587_P001 Maize plastid 12.07 5.67
Zm00001d050003_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid 6.9 4.88
Zm00001d010387_P001 Maize plastid 6.03 3.87
Zm00001d049253_P001 Maize extracellular 6.03 3.24
Protein Annotations
Gene3D:2.30.30.30Gene3D:2.40.50.740MapMan:35.1UniProt:A0A1D6PZL6ProteinID:AQK51864.1GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003735GO:GO:0005198GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0006412GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0019538InterPro:IPR014722InterPro:IPR038237
PFAM:PD002667PFAM:PF00900PANTHER:PTHR11581PANTHER:PTHR11581:SF10InterPro:Rib_L2_dom2InterPro:Ribosomal_S4e
InterPro:Ribosomal_S4e_central_regionInterPro:Ribosomal_S4e_central_sfSignalP:SignalP-noTMUniParc:UPI00084326A7EnsemblPlantsGene:Zm00001d050071EnsemblPlants:Zm00001d050071_P001
EnsemblPlants:Zm00001d050071_T001SEG:seg::::
Description
Putative ribosomal protein S4 (RPS4A) family protein
Coordinates
chr4:+:64002040..64002390
Molecular Weight (calculated)
13204.3 Da
IEP (calculated)
9.010
GRAVY (calculated)
0.067
Length
116 amino acids
Sequence
(BLAST)
001: MSFPSCEMLT AFLLVCVQLK LCKVRSVQFG QKGIPYLNTY NGRTIRYPDP LIKANDTIKI DLENNKIMDF FKFDIGNVVM VTGGRNTRCV GVIKNWEKHK
101: GSFEVIDVQL GAFCYV
Best Arabidopsis Sequence Match ( AT2G17360.1 )
(BLAST)
001: MARGLKKHLK RLNAPKHWML DKLGGAFAPK PSSGPHKSRE CLPLVLIIRN RLKYALTYRE VISILMQRHI QVDGKVRTDK TYPAGFMDVV SIPKTNENFR
101: LLYDTKGRFR LHSIKDEEAK FKLCKVRSIQ FGQKGIPYLN TYDGRTIRYP DPLIKPNDTI KLDLEENKIV EFIKFDVGNV VMVTGGRNRG RVGVIKNREK
201: HKGSFETIHI QDSTGHEFAT RLGNVYTIGK GTKPWVSLPK GKGIKLTIIE EARKRLSAQQ A
Arabidopsis Description
RPS4A40S ribosomal protein S4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93VH9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.