Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d000121_P001 | Maize | cytosol | 14.97 | 54.13 |
| Zm00001d004880_P001 | Maize | cytosol | 13.71 | 50.47 |
| Zm00001d015481_P001 | Maize | cytosol | 12.69 | 49.51 |
| Zm00001d005432_P003 | Maize | cytosol, mitochondrion | 15.23 | 44.12 |
| Zm00001d015857_P002 | Maize | cytosol | 13.96 | 43.65 |
| Zm00001d035215_P001 | Maize | cytosol | 8.88 | 43.21 |
| Zm00001d006068_P001 | Maize | cytosol | 13.45 | 41.73 |
| Zm00001d045775_P001 | Maize | cytosol | 10.15 | 41.67 |
| Zm00001d050071_P001 | Maize | endoplasmic reticulum, extracellular | 11.93 | 40.52 |
| Zm00001d037427_P001 | Maize | extracellular | 13.71 | 40.0 |
| Zm00001d031575_P001 | Maize | extracellular | 13.71 | 37.24 |
| Zm00001d030502_P001 | Maize | cytosol | 13.2 | 37.14 |
| Zm00001d033604_P001 | Maize | mitochondrion | 12.18 | 36.09 |
| Zm00001d015887_P001 | Maize | cytosol | 13.71 | 36.0 |
| Zm00001d005247_P001 | Maize | mitochondrion | 12.18 | 33.57 |
| Zm00001d019693_P001 | Maize | cytosol, plastid | 14.21 | 30.94 |
| Zm00001d009343_P001 | Maize | mitochondrion | 14.97 | 30.73 |
| Zm00001d024029_P001 | Maize | cytosol | 8.88 | 30.7 |
| Zm00001d009518_P001 | Maize | cytosol | 13.45 | 30.64 |
| Zm00001d004105_P001 | Maize | extracellular, plastid | 14.97 | 30.57 |
| Zm00001d031460_P001 | Maize | cytosol | 10.15 | 30.08 |
| Zm00001d053283_P002 | Maize | cytosol | 13.96 | 30.05 |
| Zm00001d035647_P001 | Maize | cytosol | 10.91 | 29.66 |
| Zm00001d030402_P001 | Maize | cytosol, plastid | 14.47 | 29.38 |
| Zm00001d010037_P001 | Maize | mitochondrion | 9.64 | 28.36 |
| Zm00001d051261_P001 | Maize | cytosol | 13.96 | 26.7 |
| Zm00001d034790_P001 | Maize | peroxisome | 16.5 | 26.32 |
| GSMUA_Achr11P... | Banana | cytosol | 16.24 | 25.91 |
| GSMUA_Achr5P27000_001 | Banana | cytosol | 16.24 | 25.91 |
| EER90550 | Sorghum | cytosol | 17.26 | 25.76 |
| Zm00001d012878_P001 | Maize | plasma membrane | 17.26 | 25.66 |
| Os02t0105900-01 | Rice | nucleus | 17.26 | 25.66 |
| Zm00001d008887_P002 | Maize | cytosol | 17.26 | 25.56 |
| Zm00001d019486_P001 | Maize | cytosol | 13.2 | 25.37 |
| Zm00001d036575_P001 | Maize | mitochondrion | 13.2 | 25.24 |
| TraesCS1A01G092900.1 | Wheat | golgi, nucleus | 16.75 | 24.91 |
| HORVU1Hr1G021720.1 | Barley | cytosol | 16.75 | 24.91 |
| TraesCS1B01G120600.1 | Wheat | cytosol | 16.75 | 24.91 |
| TraesCS1D01G101600.1 | Wheat | cytosol | 16.75 | 24.91 |
| Zm00001d046153_P001 | Maize | plastid | 19.29 | 24.05 |
| Zm00001d033737_P001 | Maize | cytosol | 5.33 | 23.86 |
| Zm00001d015817_P002 | Maize | plastid | 15.74 | 22.55 |
| GSMUA_Achr2P01640_001 | Banana | cytosol | 17.26 | 21.86 |
| Zm00001d016333_P001 | Maize | cytosol | 15.48 | 21.79 |
| GSMUA_Achr3P23970_001 | Banana | cytosol | 16.5 | 21.38 |
| Zm00001d045627_P001 | Maize | cytosol, plastid | 9.64 | 21.11 |
| GSMUA_Achr3P00760_001 | Banana | cytosol, plasma membrane | 16.5 | 21.1 |
| Zm00001d037876_P001 | Maize | cytosol | 14.47 | 21.03 |
| Zm00001d031743_P001 | Maize | cytosol | 9.64 | 18.91 |
| Zm00001d019999_P001 | Maize | cytosol | 14.72 | 18.83 |
| Zm00001d052602_P001 | Maize | extracellular | 5.84 | 17.56 |
| Zm00001d045876_P002 | Maize | plasma membrane | 9.39 | 17.21 |
| Zm00001d009287_P001 | Maize | cytosol | 5.84 | 17.04 |
| Zm00001d045958_P001 | Maize | cytosol | 15.99 | 16.98 |
| Zm00001d021480_P001 | Maize | plasma membrane | 10.91 | 16.73 |
| Zm00001d019803_P001 | Maize | cytosol | 9.64 | 15.77 |
| Zm00001d005030_P009 | Maize | cytosol | 4.57 | 14.75 |
| Zm00001d010386_P002 | Maize | extracellular, peroxisome, plasma membrane | 5.33 | 14.48 |
| Zm00001d045942_P001 | Maize | cytosol | 14.21 | 14.21 |
| Zm00001d004587_P001 | Maize | plastid | 7.87 | 12.55 |
| Zm00001d042154_P021 | Maize | plastid | 14.21 | 11.81 |
| Zm00001d041311_P002 | Maize | cytosol, extracellular, nucleus | 2.28 | 10.59 |
| Zm00001d050845_P002 | Maize | cytosol | 5.08 | 10.15 |
| Zm00001d013036_P001 | Maize | plastid | 7.87 | 10.0 |
| Zm00001d004990_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid | 6.85 | 9.31 |
| Zm00001d050009_P001 | Maize | plastid | 2.28 | 9.18 |
| Zm00001d035807_P001 | Maize | cytosol | 7.61 | 8.4 |
| Zm00001d049112_P001 | Maize | cytosol, peroxisome, plastid | 5.33 | 6.4 |
| Zm00001d049253_P001 | Maize | extracellular | 3.3 | 6.02 |
| Zm00001d036129_P001 | Maize | vacuole | 5.08 | 4.95 |
| Zm00001d010387_P001 | Maize | plastid | 2.03 | 4.42 |
| Zm00001d050003_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid | 1.78 | 4.27 |
| Zm00001d005608_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 8.12 | 4.07 |
| Zm00001d019111_P002 | Maize | mitochondrion | 1.27 | 1.71 |
Protein Annotations
| Gene3D:2.30.30.30 | MapMan:35.1 | UniProt:A0A1D6DSN8 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR014722 |
| ProteinID:ONM11921.1 | PFAM:PD002667 | PANTHER:PTHR11581 | PANTHER:PTHR11581:SF10 | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_S4e |
| InterPro:Ribosomal_S4e_central_region | UniParc:UPI000842F0AB | EnsemblPlantsGene:Zm00001d001770 | EnsemblPlants:Zm00001d001770_P002 | EnsemblPlants:Zm00001d001770_T002 | SEG:seg |
Description
40S ribosomal protein S4-3
Coordinates
chr2:-:432594..437077
Molecular Weight (calculated)
42868.6 Da
IEP (calculated)
8.841
GRAVY (calculated)
-0.229
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKPPWPTSP CSGPTSSPSC CCVQPMPLPP SSSLQQPYHG CAPASMVSSP QPQRRTCRRP HVQLLHPPGS LPAPTRFARS DRSARRALPM PARERPLPSL
101: LLSIDAQADA ELPAPPDGVV KHLELKSPCL SKEVIKGVRS CDARQVSEFL DSKSETDVDV DYNSLYSKQD FLQGEIHAIR YSYLRFARSH TVKYGVEITL
201: QRLGVSGGAL SVAAFGSTKS RINGGTLISL ALVLEFKLGG VKMENVYKAT VGATAQNGYY VAYDGWGNRE EVTEENLATL FINCGQVVDC RMCGDPNSVL
301: SLTMNVKCVQ GLSTAQTLTR RFGTCTHATT TRNGTIKIDL ETNKIMDFIK FDVGNVVMMT GGTNTGRVGV IKNREKHKGS FETIHVLLGA FCYV
101: LLSIDAQADA ELPAPPDGVV KHLELKSPCL SKEVIKGVRS CDARQVSEFL DSKSETDVDV DYNSLYSKQD FLQGEIHAIR YSYLRFARSH TVKYGVEITL
201: QRLGVSGGAL SVAAFGSTKS RINGGTLISL ALVLEFKLGG VKMENVYKAT VGATAQNGYY VAYDGWGNRE EVTEENLATL FINCGQVVDC RMCGDPNSVL
301: SLTMNVKCVQ GLSTAQTLTR RFGTCTHATT TRNGTIKIDL ETNKIMDFIK FDVGNVVMMT GGTNTGRVGV IKNREKHKGS FETIHVLLGA FCYV
001: MARGLKKHLK RLNAPKHWML DKLGGAFAPK PSSGPHKSRE CLPLVLIIRN RLKYALTYRE VISILMQRHI QVDGKVRTDK TYPAGFMDVV SIPKTNENFR
101: LLYDTKGRFR LHSIKDEEAK FKLCKVRSIQ FGQKGIPYLN TYDGRTIRYP DPLIKPNDTI KLDLEANKIV EFIKFDVGNV VMVTGGRNRG RVGVIKNREK
201: HKGSFETIHI QDSTGHEFAT RLGNVYTIGK GTKPWVSLPK GKGIKLTIIE EARKRLASQQ AA
101: LLYDTKGRFR LHSIKDEEAK FKLCKVRSIQ FGQKGIPYLN TYDGRTIRYP DPLIKPNDTI KLDLEANKIV EFIKFDVGNV VMVTGGRNRG RVGVIKNREK
201: HKGSFETIHI QDSTGHEFAT RLGNVYTIGK GTKPWVSLPK GKGIKLTIIE EARKRLASQQ AA
Arabidopsis Description
RPS4D40S ribosomal protein S4-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYK6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.