Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d035647_P001 | Maize | cytosol | 59.71 | 84.83 |
| Zm00001d015481_P001 | Maize | cytosol | 36.41 | 74.26 |
| Zm00001d050071_P001 | Maize | endoplasmic reticulum, extracellular | 39.81 | 70.69 |
| Zm00001d035215_P001 | Maize | cytosol | 27.18 | 69.14 |
| Zm00001d005432_P003 | Maize | cytosol, mitochondrion | 43.69 | 66.18 |
| Zm00001d006068_P001 | Maize | cytosol | 40.78 | 66.14 |
| Zm00001d009518_P001 | Maize | cytosol | 51.94 | 61.85 |
| Zm00001d033737_P001 | Maize | cytosol | 26.21 | 61.36 |
| Zm00001d031575_P001 | Maize | extracellular | 42.72 | 60.69 |
| Zm00001d037427_P001 | Maize | extracellular | 38.84 | 59.26 |
| Zm00001d005247_P001 | Maize | mitochondrion | 40.78 | 58.74 |
| Zm00001d033604_P001 | Maize | mitochondrion | 35.92 | 55.64 |
| Zm00001d024029_P001 | Maize | cytosol | 30.1 | 54.39 |
| Zm00001d030502_P001 | Maize | cytosol | 34.95 | 51.43 |
| Zm00001d053283_P002 | Maize | cytosol | 43.69 | 49.18 |
| Zm00001d000121_P001 | Maize | cytosol | 25.73 | 48.62 |
| Zm00001d015817_P002 | Maize | plastid | 64.08 | 48.0 |
| Zm00001d019693_P001 | Maize | cytosol, plastid | 41.75 | 47.51 |
| Zm00001d004105_P001 | Maize | extracellular, plastid | 43.69 | 46.63 |
| Zm00001d051261_P001 | Maize | cytosol | 45.63 | 45.63 |
| Zm00001d015857_P002 | Maize | cytosol | 27.18 | 44.44 |
| Zm00001d009343_P001 | Maize | mitochondrion | 41.26 | 44.27 |
| Zm00001d010037_P001 | Maize | mitochondrion | 28.16 | 43.28 |
| Zm00001d005030_P009 | Maize | cytosol | 25.24 | 42.62 |
| Zm00001d004880_P001 | Maize | cytosol | 21.84 | 42.06 |
| Zm00001d052602_P001 | Maize | extracellular | 26.21 | 41.22 |
| GSMUA_Achr11P... | Banana | cytosol | 45.15 | 37.65 |
| Zm00001d034790_P001 | Maize | peroxisome | 45.15 | 37.65 |
| Zm00001d019486_P001 | Maize | cytosol | 37.38 | 37.56 |
| GSMUA_Achr5P27000_001 | Banana | cytosol | 44.66 | 37.25 |
| EER90550 | Sorghum | cytosol | 47.57 | 37.12 |
| Zm00001d012878_P001 | Maize | plasma membrane | 47.57 | 36.98 |
| Os02t0105900-01 | Rice | nucleus | 47.09 | 36.6 |
| Zm00001d010386_P002 | Maize | extracellular, peroxisome, plasma membrane | 25.73 | 36.55 |
| HORVU1Hr1G021720.1 | Barley | cytosol | 46.6 | 36.23 |
| TraesCS1A01G092900.1 | Wheat | golgi, nucleus | 46.6 | 36.23 |
| TraesCS1B01G120600.1 | Wheat | cytosol | 46.6 | 36.23 |
| TraesCS1D01G101600.1 | Wheat | cytosol | 46.6 | 36.23 |
| Zm00001d045775_P001 | Maize | cytosol | 16.5 | 35.42 |
| Zm00001d045627_P001 | Maize | cytosol, plastid | 29.61 | 33.89 |
| Zm00001d008887_P002 | Maize | cytosol | 43.2 | 33.46 |
| Zm00001d015887_P001 | Maize | cytosol | 24.27 | 33.33 |
| Zm00001d030402_P001 | Maize | cytosol, plastid | 31.07 | 32.99 |
| Zm00001d031743_P001 | Maize | cytosol | 31.55 | 32.34 |
| Zm00001d037876_P001 | Maize | cytosol | 42.23 | 32.1 |
| GSMUA_Achr3P23970_001 | Banana | cytosol | 47.09 | 31.91 |
| GSMUA_Achr3P00760_001 | Banana | cytosol, plasma membrane | 47.09 | 31.49 |
| Zm00001d016333_P001 | Maize | cytosol | 42.72 | 31.43 |
| GSMUA_Achr2P01640_001 | Banana | cytosol | 45.63 | 30.23 |
| Zm00001d045876_P002 | Maize | plasma membrane | 30.1 | 28.84 |
| Zm00001d009287_P001 | Maize | cytosol | 18.45 | 28.15 |
| Zm00001d050845_P002 | Maize | cytosol | 26.21 | 27.41 |
| Zm00001d031460_P001 | Maize | cytosol | 17.48 | 27.07 |
| Zm00001d019999_P001 | Maize | cytosol | 39.81 | 26.62 |
| Zm00001d050009_P001 | Maize | plastid | 12.14 | 25.51 |
| Zm00001d045958_P001 | Maize | cytosol | 44.17 | 24.53 |
| Zm00001d021480_P001 | Maize | plasma membrane | 30.58 | 24.51 |
| Zm00001d019803_P001 | Maize | cytosol | 25.73 | 21.99 |
| Zm00001d046153_P001 | Maize | plastid | 31.07 | 20.25 |
| Zm00001d045942_P001 | Maize | cytosol | 38.35 | 20.05 |
| Zm00001d042154_P021 | Maize | plastid | 44.17 | 19.2 |
| Zm00001d004990_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid | 25.24 | 17.93 |
| Zm00001d013036_P001 | Maize | plastid | 25.24 | 16.77 |
| Zm00001d035807_P001 | Maize | cytosol | 27.67 | 15.97 |
| Zm00001d049112_P001 | Maize | cytosol, peroxisome, plastid | 24.27 | 15.24 |
| Zm00001d036129_P001 | Maize | vacuole | 26.21 | 13.37 |
| Zm00001d001770_P002 | Maize | plastid | 25.24 | 13.2 |
| Zm00001d019111_P002 | Maize | mitochondrion | 12.62 | 8.87 |
| Zm00001d004587_P001 | Maize | plastid | 10.19 | 8.5 |
| Zm00001d041311_P002 | Maize | cytosol, extracellular, nucleus | 3.4 | 8.24 |
| Zm00001d005608_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 28.64 | 7.51 |
| Zm00001d050003_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid | 5.34 | 6.71 |
| Zm00001d010387_P001 | Maize | plastid | 4.37 | 4.97 |
| Zm00001d049253_P001 | Maize | extracellular | 4.37 | 4.17 |
Protein Annotations
| MapMan:15.3.3.3.3 | Gene3D:2.30.30.30 | Gene3D:2.40.50.740 | UniProt:A0A1D6LPK7 | ProteinID:AQK81435.1 | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019538 | InterPro:IPR014722 | InterPro:IPR038237 | PFAM:PD002667 |
| PFAM:PF00900 | PANTHER:PTHR11581 | PANTHER:PTHR11581:SF10 | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_S4e | InterPro:Ribosomal_S4e_central_region |
| InterPro:Ribosomal_S4e_central_sf | TMHMM:TMhelix | UniParc:UPI000844B533 | EnsemblPlantsGene:Zm00001d036575 | EnsemblPlants:Zm00001d036575_P001 | EnsemblPlants:Zm00001d036575_T001 |
Description
Putative ribosomal protein S4 (RPS4A) family protein
Coordinates
chr6:+:93371896..93375751
Molecular Weight (calculated)
23417.1 Da
IEP (calculated)
10.168
GRAVY (calculated)
0.130
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGLPRRLSR DSRVLMIYKS LLYGKLAGNM LHLIEACILR KLIDTSAYLW PGYVVPSGTL KDTALPQESP WLNFMKVSRL SGPLIDALVA SPASRCFKLC
101: KVRSVQFGQK GISYLNTYDG RTIRYPDLLI KANDTIKIDL ETNKIMDFFK FDVSNVFMVT GGRNTRRVGV IKNWEKHKAS FEVIDVLLGA FCMLCLVFSY
201: LLYKKT
101: KVRSVQFGQK GISYLNTYDG RTIRYPDLLI KANDTIKIDL ETNKIMDFFK FDVSNVFMVT GGRNTRRVGV IKNWEKHKAS FEVIDVLLGA FCMLCLVFSY
201: LLYKKT
001: MLDKLGGAFA PKPSSGPHKS RECLPLVLII RNRLKYALTY REVISILMQR HIQVDGKVRT DKTYPAGFMD VVSIPKTNEN FRLLYDTKGR FRLHSIKDEE
101: AKFKLCKVRS IQFGQKGIPY LNTYDGRTIR YPDPLIKPND TIKLDLEENK IVEFIKFDVG NVVMVTGGRN RGRVGVIKNR EKHKGSFETI HIQDSTGHEF
201: ATRLGNVYTI GKGTKPWVSL PKGKGIKLTI IEEARKRLAS QQAA
101: AKFKLCKVRS IQFGQKGIPY LNTYDGRTIR YPDPLIKPND TIKLDLEENK IVEFIKFDVG NVVMVTGGRN RGRVGVIKNR EKHKGSFETI HIQDSTGHEF
201: ATRLGNVYTI GKGTKPWVSL PKGKGIKLTI IEEARKRLAS QQAA
Arabidopsis Description
RPS4B40S ribosomal protein S4-2 [Source:UniProtKB/Swiss-Prot;Acc:P49204]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.