Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, mitochondrion, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 2
- extracellular 2
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010387_P001 | Maize | plastid | 60.98 | 55.25 |
| Zm00001d005432_P003 | Maize | cytosol, mitochondrion | 8.54 | 10.29 |
| Zm00001d033737_P001 | Maize | cytosol | 4.88 | 9.09 |
| Zm00001d005030_P009 | Maize | cytosol | 6.71 | 9.02 |
| Zm00001d004990_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid | 15.85 | 8.97 |
| Zm00001d013036_P001 | Maize | plastid | 15.24 | 8.06 |
| Solyc04g016350.1.1 | Tomato | nucleus, unclear | 12.2 | 8.0 |
| Solyc02g070320.2.1 | Tomato | nucleus, unclear | 12.8 | 7.95 |
| PGSC0003DMT400054543 | Potato | mitochondrion | 12.8 | 7.95 |
| KRH76010 | Soybean | endoplasmic reticulum | 12.8 | 7.95 |
| KRH65626 | Soybean | nucleus | 12.8 | 7.95 |
| Solyc02g070330.2.1 | Tomato | mitochondrion | 12.8 | 7.95 |
| Solyc02g070340.2.1 | Tomato | mitochondrion | 12.8 | 7.95 |
| Solyc02g070350.2.1 | Tomato | nucleus, unclear | 12.8 | 7.95 |
| Solyc02g070360.2.1 | Tomato | nucleus | 12.8 | 7.95 |
| Zm00001d012878_P001 | Maize | plasma membrane | 12.8 | 7.92 |
| AT2G17360.1 | Thale cress | mitochondrion | 12.2 | 7.66 |
| Zm00001d052602_P001 | Maize | extracellular | 6.1 | 7.63 |
| Solyc06g007360.2.1 | Tomato | plastid | 12.2 | 7.58 |
| VIT_00s0252g00080.t01 | Wine grape | nucleus | 4.88 | 7.34 |
| AT5G07090.1 | Thale cress | mitochondrion | 11.59 | 7.25 |
| AT5G58420.1 | Thale cress | mitochondrion | 11.59 | 7.25 |
| Bra028708.1-P | Field mustard | cytosol | 11.59 | 7.25 |
| VIT_08s0058g00390.t01 | Wine grape | mitochondrion, plastid | 12.2 | 7.09 |
| Zm00001d041311_P002 | Maize | cytosol, extracellular, nucleus | 3.66 | 7.06 |
| PGSC0003DMT400052955 | Potato | cytosol | 7.93 | 6.99 |
| VIT_06s0004g07150.t01 | Wine grape | cytosol | 12.8 | 6.95 |
| Zm00001d050071_P001 | Maize | endoplasmic reticulum, extracellular | 4.88 | 6.9 |
| Zm00001d010386_P002 | Maize | extracellular, peroxisome, plasma membrane | 6.1 | 6.9 |
| Bra005923.1-P | Field mustard | cytosol | 11.59 | 6.81 |
| Zm00001d031460_P001 | Maize | cytosol | 5.49 | 6.77 |
| Zm00001d009518_P001 | Maize | cytosol | 6.71 | 6.36 |
| Bra020369.1-P | Field mustard | cytosol | 11.59 | 6.31 |
| Zm00001d045775_P001 | Maize | cytosol | 3.66 | 6.25 |
| Zm00001d035647_P001 | Maize | cytosol | 5.49 | 6.21 |
| VIT_13s0067g01820.t01 | Wine grape | cytosol | 9.15 | 6.1 |
| Zm00001d015481_P001 | Maize | cytosol | 3.66 | 5.94 |
| Zm00001d009287_P001 | Maize | cytosol | 4.88 | 5.93 |
| Zm00001d015817_P002 | Maize | plastid | 9.76 | 5.82 |
| Bra005118.1-P | Field mustard | cytosol | 4.27 | 5.74 |
| Zm00001d034790_P001 | Maize | peroxisome | 8.54 | 5.67 |
| Zm00001d053283_P002 | Maize | cytosol | 6.1 | 5.46 |
| CDY00352 | Canola | cytosol | 4.27 | 5.38 |
| Zm00001d036575_P001 | Maize | mitochondrion | 6.71 | 5.34 |
| Zm00001d004105_P001 | Maize | extracellular, plastid | 6.1 | 5.18 |
| Zm00001d037876_P001 | Maize | cytosol | 8.54 | 5.17 |
| Zm00001d050009_P001 | Maize | plastid | 3.05 | 5.1 |
| Zm00001d049253_P001 | Maize | extracellular | 6.71 | 5.09 |
| Zm00001d050845_P002 | Maize | cytosol | 6.1 | 5.08 |
| Zm00001d019693_P001 | Maize | cytosol, plastid | 5.49 | 4.97 |
| Zm00001d035215_P001 | Maize | cytosol | 2.44 | 4.94 |
| Zm00001d005247_P001 | Maize | mitochondrion | 4.27 | 4.9 |
| Zm00001d019486_P001 | Maize | cytosol | 6.1 | 4.88 |
| Zm00001d006068_P001 | Maize | cytosol | 3.66 | 4.72 |
| Zm00001d004880_P001 | Maize | cytosol | 3.05 | 4.67 |
| CDY36197 | Canola | cytosol | 3.66 | 4.65 |
| Zm00001d030402_P001 | Maize | cytosol, plastid | 5.49 | 4.64 |
| Zm00001d037427_P001 | Maize | extracellular | 3.66 | 4.44 |
| Bra033109.1-P | Field mustard | cytosol | 3.05 | 4.27 |
| Zm00001d009343_P001 | Maize | mitochondrion | 4.88 | 4.17 |
| Zm00001d015857_P002 | Maize | cytosol | 3.05 | 3.97 |
| Zm00001d010037_P001 | Maize | mitochondrion | 3.05 | 3.73 |
| Zm00001d045876_P002 | Maize | plasma membrane | 4.88 | 3.72 |
| Zm00001d019999_P001 | Maize | cytosol | 6.71 | 3.57 |
| Zm00001d024029_P001 | Maize | cytosol | 2.44 | 3.51 |
| Zm00001d031575_P001 | Maize | extracellular | 3.05 | 3.45 |
| Zm00001d051261_P001 | Maize | cytosol | 4.27 | 3.4 |
| Zm00001d035807_P001 | Maize | cytosol | 7.32 | 3.36 |
| Zm00001d015887_P001 | Maize | cytosol | 3.05 | 3.33 |
| Zm00001d005608_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 15.85 | 3.31 |
| Zm00001d016333_P001 | Maize | cytosol | 5.49 | 3.21 |
| Zm00001d046153_P001 | Maize | plastid | 6.1 | 3.16 |
| Zm00001d033604_P001 | Maize | mitochondrion | 2.44 | 3.01 |
| Zm00001d030502_P001 | Maize | cytosol | 2.44 | 2.86 |
| Zm00001d004587_P001 | Maize | plastid | 4.27 | 2.83 |
| Zm00001d045627_P001 | Maize | cytosol, plastid | 3.05 | 2.78 |
| Zm00001d000121_P001 | Maize | cytosol | 1.83 | 2.75 |
| Zm00001d036129_P001 | Maize | vacuole | 6.71 | 2.72 |
| Zm00001d008887_P002 | Maize | cytosol | 4.27 | 2.63 |
| Zm00001d045958_P001 | Maize | cytosol | 5.49 | 2.43 |
| Zm00001d045942_P001 | Maize | cytosol | 5.49 | 2.28 |
| Zm00001d049112_P001 | Maize | cytosol, peroxisome, plastid | 4.27 | 2.13 |
| Zm00001d021480_P001 | Maize | plasma membrane | 3.05 | 1.95 |
| Zm00001d042154_P021 | Maize | plastid | 5.49 | 1.9 |
| Zm00001d001770_P002 | Maize | plastid | 4.27 | 1.78 |
| Zm00001d019111_P002 | Maize | mitochondrion | 3.05 | 1.71 |
| CDY71580 | Canola | cytosol | 1.22 | 1.69 |
| Zm00001d019803_P001 | Maize | cytosol | 2.44 | 1.66 |
| CDY42359 | Canola | cytosol | 1.22 | 1.61 |
| Zm00001d031743_P001 | Maize | cytosol | 1.22 | 1.0 |
Protein Annotations
| EnsemblPlants:Zm00001d050003_P001 | EnsemblPlants:Zm00001d050003_T001 | EnsemblPlantsGene:Zm00001d050003 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | ProteinID:AQK51765.1 | SEG:seg | UniParc:UPI0008434730 | UniProt:A0A1D6PZB1 |
| MapMan:35.2 | : | : | : | : | : |
Description
40S ribosomal protein S4-3
Coordinates
chr4:+:58848376..58850662
Molecular Weight (calculated)
18026.7 Da
IEP (calculated)
9.172
GRAVY (calculated)
-0.170
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMLLHQPLL LLNASADHHL PWRRSSPISS CQGAVAELAL PQPWTSSGHP SPISPRPHPL AAAPSYSWWL SLIPWMLAVL PSLVLTSAPC VGWPVAPALD
101: YPRARPRYNN NNHETPSCRA LYVFDEIPQR APTRSAQPLR DVTNSARCRC RASCIACSTK IPSP
101: YPRARPRYNN NNHETPSCRA LYVFDEIPQR APTRSAQPLR DVTNSARCRC RASCIACSTK IPSP
001: MEEGRDDEYC SFSNSGDRDG GLSGCFFLDH VGQVLLSRNH DGLSWKCLDS SDCEGTTCLG IIICENSETE IKFSDIYAVE FVSYGLVHSP KLGLRHAKEC
101: FRERLLNTQE MYRFTVHGFQ SSPKEPCLWN LAAFTFGHMD LQTCQSWMDQ LNYSLIKEVE RPRNLLVFVH PKSGKGNGSK VWETVSKIFI RAKVNTKVIV
201: TERAGHAFDV MASIQNKELH TYDGIIAVGG DGFFNEILNG YLLSRLKVPL PPSPSDSFNS VQSRGSSSVP EPGDEVHETD QKEHYPLLPD SVQEVMNFRT
301: VNGSCEGIED PDHPFSSERP RFGLIPAGST DAIVMCTTGA RDPVTSALHI ILGRKLFLDA MQVVRWKTAS TSTIEPYIRY AASFAGYGFY GDVISESEKY
401: RWMGPKRYDY VGTKIFLKHR SYEAEVMFEE AESENSKASL HTRSKTWPFR NTTRSEKILC RANCKICNSK VGWNSASTTL NPCPEKTRWC RTKGRFLSIG
501: AAVMSNRNER APDGLVVDAH LSDGFLHLIL IKDCSRPKYL WHLTELAKRG GEPLNFEFVE YHKTRAFTFT SFGEESVWNL DGEIFEAHQL SAQVLRGLIP
601: LFASGPEI
101: FRERLLNTQE MYRFTVHGFQ SSPKEPCLWN LAAFTFGHMD LQTCQSWMDQ LNYSLIKEVE RPRNLLVFVH PKSGKGNGSK VWETVSKIFI RAKVNTKVIV
201: TERAGHAFDV MASIQNKELH TYDGIIAVGG DGFFNEILNG YLLSRLKVPL PPSPSDSFNS VQSRGSSSVP EPGDEVHETD QKEHYPLLPD SVQEVMNFRT
301: VNGSCEGIED PDHPFSSERP RFGLIPAGST DAIVMCTTGA RDPVTSALHI ILGRKLFLDA MQVVRWKTAS TSTIEPYIRY AASFAGYGFY GDVISESEKY
401: RWMGPKRYDY VGTKIFLKHR SYEAEVMFEE AESENSKASL HTRSKTWPFR NTTRSEKILC RANCKICNSK VGWNSASTTL NPCPEKTRWC RTKGRFLSIG
501: AAVMSNRNER APDGLVVDAH LSDGFLHLIL IKDCSRPKYL WHLTELAKRG GEPLNFEFVE YHKTRAFTFT SFGEESVWNL DGEIFEAHQL SAQVLRGLIP
601: LFASGPEI
Arabidopsis Description
CERKCeramide kinase [Source:UniProtKB/Swiss-Prot;Acc:Q6USK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.