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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 5
  • plastid 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d049112_P001 Maize cytosol, peroxisome, plastid 81.91 73.17
Zm00001d033737_P001 Maize cytosol 9.56 31.82
Zm00001d005030_P009 Maize cytosol 12.29 29.51
Zm00001d015481_P001 Maize cytosol 8.53 24.75
Zm00001d010386_P002 Maize extracellular, peroxisome, plasma membrane 11.26 22.76
Zm00001d050009_P001 Maize plastid 7.51 22.45
Zm00001d052602_P001 Maize extracellular 9.9 22.14
Zm00001d050071_P001 Maize endoplasmic reticulum, extracellular 8.53 21.55
Zm00001d050845_P002 Maize cytosol 13.99 20.81
Zm00001d005432_P003 Maize cytosol, mitochondrion 9.56 20.59
Zm00001d006068_P001 Maize cytosol 8.87 20.47
Zm00001d037427_P001 Maize extracellular 8.87 19.26
Zm00001d035215_P001 Maize cytosol 4.78 17.28
Zm00001d031575_P001 Maize extracellular 8.53 17.24
Zm00001d035647_P001 Maize cytosol 8.53 17.24
Zm00001d005247_P001 Maize mitochondrion 8.19 16.78
Zm00001d053283_P002 Maize cytosol 9.56 15.3
Zm00001d009518_P001 Maize cytosol 8.87 15.03
Zm00001d019486_P001 Maize cytosol 9.9 14.15
Zm00001d051261_P001 Maize cytosol 9.9 14.08
Zm00001d009343_P001 Maize mitochondrion 9.22 14.06
Zm00001d004105_P001 Maize extracellular, plastid 9.22 13.99
Zm00001d019693_P001 Maize cytosol, plastid 8.19 13.26
Zm00001d036575_P001 Maize mitochondrion 8.87 12.62
Zm00001d004990_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid 11.95 12.07
Zm00001d009287_P001 Maize cytosol 5.46 11.85
EER90550 Sorghum cytosol 10.58 11.74
GSMUA_Achr11P... Banana cytosol 9.9 11.74
Os02t0105900-01 Rice nucleus 10.58 11.7
TraesCS1D01G101600.1 Wheat cytosol 10.58 11.7
TraesCS1B01G120600.1 Wheat cytosol 10.58 11.7
TraesCS1A01G092900.1 Wheat golgi, nucleus 10.58 11.7
Zm00001d012878_P001 Maize plasma membrane 10.58 11.7
HORVU1Hr1G021720.1 Barley cytosol 10.58 11.7
Zm00001d030502_P001 Maize cytosol 5.46 11.43
Zm00001d034790_P001 Maize peroxisome 9.56 11.34
GSMUA_Achr5P27000_001 Banana cytosol 9.56 11.34
Zm00001d013036_P001 Maize plastid 11.95 11.29
Zm00001d033604_P001 Maize mitochondrion 5.12 11.28
Zm00001d008887_P002 Maize cytosol 9.9 10.9
GSMUA_Achr3P23970_001 Banana cytosol 10.92 10.53
Zm00001d036129_P001 Maize vacuole 14.33 10.4
GSMUA_Achr3P00760_001 Banana cytosol, plasma membrane 10.92 10.39
Zm00001d035807_P001 Maize cytosol 12.63 10.36
Zm00001d016333_P001 Maize cytosol 9.9 10.36
Zm00001d037876_P001 Maize cytosol 9.56 10.33
Zm00001d015817_P002 Maize plastid 9.56 10.18
GSMUA_Achr2P01640_001 Banana cytosol 10.58 9.97
Zm00001d041311_P002 Maize cytosol, extracellular, nucleus 2.39 8.24
Zm00001d045958_P001 Maize cytosol 10.24 8.09
Zm00001d042154_P021 Maize plastid 10.58 6.54
Zm00001d019999_P001 Maize cytosol 6.83 6.49
Zm00001d045942_P001 Maize cytosol 6.48 4.82
Zm00001d004880_P001 Maize cytosol 1.71 4.67
Zm00001d049253_P001 Maize extracellular 3.07 4.17
Zm00001d031460_P001 Maize cytosol 1.71 3.76
Zm00001d010037_P001 Maize mitochondrion 1.71 3.73
Zm00001d005608_P001 Maize endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole 9.9 3.69
Zm00001d024029_P001 Maize cytosol 1.37 3.51
Zm00001d015857_P002 Maize cytosol 1.37 3.17
Zm00001d050003_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid 1.71 3.05
Zm00001d010387_P001 Maize plastid 1.71 2.76
Zm00001d015887_P001 Maize cytosol 1.37 2.67
Zm00001d021480_P001 Maize plasma membrane 2.05 2.33
Zm00001d045876_P002 Maize plasma membrane 1.71 2.33
Zm00001d045627_P001 Maize cytosol, plastid 1.37 2.22
Zm00001d046153_P001 Maize plastid 2.39 2.22
Zm00001d030402_P001 Maize cytosol, plastid 1.37 2.06
Zm00001d004587_P001 Maize plastid 1.71 2.02
Zm00001d031743_P001 Maize cytosol 1.37 1.99
Zm00001d019803_P001 Maize cytosol 1.37 1.66
Zm00001d001770_P002 Maize plastid 1.71 1.27
Zm00001d045775_P001 Maize cytosol 0.0 0.0
Zm00001d000121_P001 Maize cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Zm00001d019111_P002EnsemblPlants:Zm00001d019111_T002EnsemblPlantsGene:Zm00001d019111Gene3D:2.40.50.740InterPro:IPR038237InterPro:Ribosomal_S4e_central_region
InterPro:Ribosomal_S4e_central_sfPANTHER:PTHR13693PANTHER:PTHR13693:SF2PFAM:PD002667PFAM:PF00900ProteinID:ONM52243.1
SEG:segUniParc:UPI0008435BC2UniProt:A0A1D6HVG2MapMan:35.1::
Description
No Description!
Coordinates
chr7:+:17261050..17265063
Molecular Weight (calculated)
33089.1 Da
IEP (calculated)
9.369
GRAVY (calculated)
-0.193
Length
293 amino acids
Sequence
(BLAST)
001: MKKREVKFVQ RPSGVRFNRY CVYRVRESRQ LPLGLGLGAP SLYAAVLARV SAAFNGPLAR AVVFGVHIDG SPSFFVCSQD GSAVLVSHTQ WPRDFSGHLV
101: VEGLLIAVIV FQLSRKSYKP PKKPLTEKEI DELCDEWEPE LLCPPIKEGA KIDAPTLERN KVVMEGFMTA IIQFLEALES FYVVERDGSI ILFLVTLGGC
201: HSSDYIKKMT LSLGLRDMAF HSAQLDPSPE HRRKFKLCKV RSVQFGQKVI PYLNTYDDRT IRLRPSHQGQ RHHQDRSGDQ QDHGLHQVVF AIS
Best Arabidopsis Sequence Match ( AT4G36480.3 )
(BLAST)
001: MASNLVEMFN AALNWVTMIL ESPSARVVLF GVPIRGHFFV EGLLGVVIII LLTRKSYKPP KRPLTEQEID ELCDEWVPEP LIPPITEDMK HEPPVLESAA
101: GPHTTVNGKD VVNFASANYL GLIGHEKLLE SCTSALEKYG VGSCGPRGFY GTIDVHLDCE TRISKFLGTP DSILYSYGLS TMFSTIPCFC KKGDVIVADE
201: GVHWGIQNGL QLSRSTIVYF KHNDMESLRI TLEKIMTKYK RSKNLRRYIV AEAVYQNSGQ IAPLDEIVKL KEKYRFRVIL DESNSFGVLG RSGRGLAEHH
301: SVPIEKIDVV TAAMGHALAT EGGFCTGNAR IIDYQVNIDH AD
Arabidopsis Description
LCB1Long chain base biosynthesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94IB8]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.