Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- plastid 1
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d049112_P001 | Maize | cytosol, peroxisome, plastid | 81.91 | 73.17 |
Zm00001d033737_P001 | Maize | cytosol | 9.56 | 31.82 |
Zm00001d005030_P009 | Maize | cytosol | 12.29 | 29.51 |
Zm00001d015481_P001 | Maize | cytosol | 8.53 | 24.75 |
Zm00001d010386_P002 | Maize | extracellular, peroxisome, plasma membrane | 11.26 | 22.76 |
Zm00001d050009_P001 | Maize | plastid | 7.51 | 22.45 |
Zm00001d052602_P001 | Maize | extracellular | 9.9 | 22.14 |
Zm00001d050071_P001 | Maize | endoplasmic reticulum, extracellular | 8.53 | 21.55 |
Zm00001d050845_P002 | Maize | cytosol | 13.99 | 20.81 |
Zm00001d005432_P003 | Maize | cytosol, mitochondrion | 9.56 | 20.59 |
Zm00001d006068_P001 | Maize | cytosol | 8.87 | 20.47 |
Zm00001d037427_P001 | Maize | extracellular | 8.87 | 19.26 |
Zm00001d035215_P001 | Maize | cytosol | 4.78 | 17.28 |
Zm00001d031575_P001 | Maize | extracellular | 8.53 | 17.24 |
Zm00001d035647_P001 | Maize | cytosol | 8.53 | 17.24 |
Zm00001d005247_P001 | Maize | mitochondrion | 8.19 | 16.78 |
Zm00001d053283_P002 | Maize | cytosol | 9.56 | 15.3 |
Zm00001d009518_P001 | Maize | cytosol | 8.87 | 15.03 |
Zm00001d019486_P001 | Maize | cytosol | 9.9 | 14.15 |
Zm00001d051261_P001 | Maize | cytosol | 9.9 | 14.08 |
Zm00001d009343_P001 | Maize | mitochondrion | 9.22 | 14.06 |
Zm00001d004105_P001 | Maize | extracellular, plastid | 9.22 | 13.99 |
Zm00001d019693_P001 | Maize | cytosol, plastid | 8.19 | 13.26 |
Zm00001d036575_P001 | Maize | mitochondrion | 8.87 | 12.62 |
Zm00001d004990_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid | 11.95 | 12.07 |
Zm00001d009287_P001 | Maize | cytosol | 5.46 | 11.85 |
EER90550 | Sorghum | cytosol | 10.58 | 11.74 |
GSMUA_Achr11P... | Banana | cytosol | 9.9 | 11.74 |
Os02t0105900-01 | Rice | nucleus | 10.58 | 11.7 |
TraesCS1D01G101600.1 | Wheat | cytosol | 10.58 | 11.7 |
TraesCS1B01G120600.1 | Wheat | cytosol | 10.58 | 11.7 |
TraesCS1A01G092900.1 | Wheat | golgi, nucleus | 10.58 | 11.7 |
Zm00001d012878_P001 | Maize | plasma membrane | 10.58 | 11.7 |
HORVU1Hr1G021720.1 | Barley | cytosol | 10.58 | 11.7 |
Zm00001d030502_P001 | Maize | cytosol | 5.46 | 11.43 |
Zm00001d034790_P001 | Maize | peroxisome | 9.56 | 11.34 |
GSMUA_Achr5P27000_001 | Banana | cytosol | 9.56 | 11.34 |
Zm00001d013036_P001 | Maize | plastid | 11.95 | 11.29 |
Zm00001d033604_P001 | Maize | mitochondrion | 5.12 | 11.28 |
Zm00001d008887_P002 | Maize | cytosol | 9.9 | 10.9 |
GSMUA_Achr3P23970_001 | Banana | cytosol | 10.92 | 10.53 |
Zm00001d036129_P001 | Maize | vacuole | 14.33 | 10.4 |
GSMUA_Achr3P00760_001 | Banana | cytosol, plasma membrane | 10.92 | 10.39 |
Zm00001d035807_P001 | Maize | cytosol | 12.63 | 10.36 |
Zm00001d016333_P001 | Maize | cytosol | 9.9 | 10.36 |
Zm00001d037876_P001 | Maize | cytosol | 9.56 | 10.33 |
Zm00001d015817_P002 | Maize | plastid | 9.56 | 10.18 |
GSMUA_Achr2P01640_001 | Banana | cytosol | 10.58 | 9.97 |
Zm00001d041311_P002 | Maize | cytosol, extracellular, nucleus | 2.39 | 8.24 |
Zm00001d045958_P001 | Maize | cytosol | 10.24 | 8.09 |
Zm00001d042154_P021 | Maize | plastid | 10.58 | 6.54 |
Zm00001d019999_P001 | Maize | cytosol | 6.83 | 6.49 |
Zm00001d045942_P001 | Maize | cytosol | 6.48 | 4.82 |
Zm00001d004880_P001 | Maize | cytosol | 1.71 | 4.67 |
Zm00001d049253_P001 | Maize | extracellular | 3.07 | 4.17 |
Zm00001d031460_P001 | Maize | cytosol | 1.71 | 3.76 |
Zm00001d010037_P001 | Maize | mitochondrion | 1.71 | 3.73 |
Zm00001d005608_P001 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 9.9 | 3.69 |
Zm00001d024029_P001 | Maize | cytosol | 1.37 | 3.51 |
Zm00001d015857_P002 | Maize | cytosol | 1.37 | 3.17 |
Zm00001d050003_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane, plastid | 1.71 | 3.05 |
Zm00001d010387_P001 | Maize | plastid | 1.71 | 2.76 |
Zm00001d015887_P001 | Maize | cytosol | 1.37 | 2.67 |
Zm00001d021480_P001 | Maize | plasma membrane | 2.05 | 2.33 |
Zm00001d045876_P002 | Maize | plasma membrane | 1.71 | 2.33 |
Zm00001d045627_P001 | Maize | cytosol, plastid | 1.37 | 2.22 |
Zm00001d046153_P001 | Maize | plastid | 2.39 | 2.22 |
Zm00001d030402_P001 | Maize | cytosol, plastid | 1.37 | 2.06 |
Zm00001d004587_P001 | Maize | plastid | 1.71 | 2.02 |
Zm00001d031743_P001 | Maize | cytosol | 1.37 | 1.99 |
Zm00001d019803_P001 | Maize | cytosol | 1.37 | 1.66 |
Zm00001d001770_P002 | Maize | plastid | 1.71 | 1.27 |
Zm00001d045775_P001 | Maize | cytosol | 0.0 | 0.0 |
Zm00001d000121_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
EnsemblPlants:Zm00001d019111_P002 | EnsemblPlants:Zm00001d019111_T002 | EnsemblPlantsGene:Zm00001d019111 | Gene3D:2.40.50.740 | InterPro:IPR038237 | InterPro:Ribosomal_S4e_central_region |
InterPro:Ribosomal_S4e_central_sf | PANTHER:PTHR13693 | PANTHER:PTHR13693:SF2 | PFAM:PD002667 | PFAM:PF00900 | ProteinID:ONM52243.1 |
SEG:seg | UniParc:UPI0008435BC2 | UniProt:A0A1D6HVG2 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7:+:17261050..17265063
Molecular Weight (calculated)
33089.1 Da
IEP (calculated)
9.369
GRAVY (calculated)
-0.193
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKREVKFVQ RPSGVRFNRY CVYRVRESRQ LPLGLGLGAP SLYAAVLARV SAAFNGPLAR AVVFGVHIDG SPSFFVCSQD GSAVLVSHTQ WPRDFSGHLV
101: VEGLLIAVIV FQLSRKSYKP PKKPLTEKEI DELCDEWEPE LLCPPIKEGA KIDAPTLERN KVVMEGFMTA IIQFLEALES FYVVERDGSI ILFLVTLGGC
201: HSSDYIKKMT LSLGLRDMAF HSAQLDPSPE HRRKFKLCKV RSVQFGQKVI PYLNTYDDRT IRLRPSHQGQ RHHQDRSGDQ QDHGLHQVVF AIS
101: VEGLLIAVIV FQLSRKSYKP PKKPLTEKEI DELCDEWEPE LLCPPIKEGA KIDAPTLERN KVVMEGFMTA IIQFLEALES FYVVERDGSI ILFLVTLGGC
201: HSSDYIKKMT LSLGLRDMAF HSAQLDPSPE HRRKFKLCKV RSVQFGQKVI PYLNTYDDRT IRLRPSHQGQ RHHQDRSGDQ QDHGLHQVVF AIS
001: MASNLVEMFN AALNWVTMIL ESPSARVVLF GVPIRGHFFV EGLLGVVIII LLTRKSYKPP KRPLTEQEID ELCDEWVPEP LIPPITEDMK HEPPVLESAA
101: GPHTTVNGKD VVNFASANYL GLIGHEKLLE SCTSALEKYG VGSCGPRGFY GTIDVHLDCE TRISKFLGTP DSILYSYGLS TMFSTIPCFC KKGDVIVADE
201: GVHWGIQNGL QLSRSTIVYF KHNDMESLRI TLEKIMTKYK RSKNLRRYIV AEAVYQNSGQ IAPLDEIVKL KEKYRFRVIL DESNSFGVLG RSGRGLAEHH
301: SVPIEKIDVV TAAMGHALAT EGGFCTGNAR IIDYQVNIDH AD
101: GPHTTVNGKD VVNFASANYL GLIGHEKLLE SCTSALEKYG VGSCGPRGFY GTIDVHLDCE TRISKFLGTP DSILYSYGLS TMFSTIPCFC KKGDVIVADE
201: GVHWGIQNGL QLSRSTIVYF KHNDMESLRI TLEKIMTKYK RSKNLRRYIV AEAVYQNSGQ IAPLDEIVKL KEKYRFRVIL DESNSFGVLG RSGRGLAEHH
301: SVPIEKIDVV TAAMGHALAT EGGFCTGNAR IIDYQVNIDH AD
Arabidopsis Description
LCB1Long chain base biosynthesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94IB8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.