Factsheet for GSMUA_Achr8P27540_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P26600_001	Banana	cytosol	94.09	94.09
VIT_02s0025g01570.t01	Wine grape	cytosol, extracellular	90.31	90.31
GSMUA_Achr1P04880_001	Banana	cytosol	90.15	90.0
Os05t0556100-01	Rice	plasma membrane	89.98	89.98
TraesCS1B01G411700.3	Wheat	cytosol	88.67	88.67
EES19921	Sorghum	cytosol	88.51	88.51
TraesCS1D01G393000.2	Wheat	cytosol	88.34	88.34
TraesCS1A01G385400.2	Wheat	cytosol, golgi, nucleus, unclear	88.34	88.34
EES01270	Sorghum	cytosol	85.71	85.71
Os01t0681100-01	Rice	cytosol, plasma membrane	25.29	83.7
Zm00001d009504_P002	Maize	cytosol	88.67	82.32
Zm00001d038955_P001	Maize	cytosol, mitochondrion, plasma membrane	88.67	80.6
HORVU1Hr1G084970.2	Barley	plasma membrane	89.0	80.18
GSMUA_Achr2P18210_001	Banana	cytosol	72.74	72.5
GSMUA_Achr11P...	Banana	cytosol	72.58	71.99
GSMUA_Achr2P21630_001	Banana	cytosol	70.77	70.77
GSMUA_AchrUn_...	Banana	cytosol	72.25	69.95
GSMUA_Achr7P11190_001	Banana	cytosol	70.11	69.77
TraesCS6B01G443600.1	Wheat	cytosol	41.71	48.57
TraesCS6D01G385300.1	Wheat	cytosol	37.11	45.66
GSMUA_Achr10P...	Banana	cytosol	35.47	27.59
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	21.51	23.52
GSMUA_Achr8P08760_001	Banana	cytosol	29.72	23.51
GSMUA_Achr1P18350_001	Banana	cytosol	27.09	18.46
GSMUA_Achr4P20040_001	Banana	cytosol	27.42	18.17
GSMUA_Achr3P01090_001	Banana	nucleus	27.26	18.08
GSMUA_Achr7P05530_001	Banana	nucleus	26.93	17.81
GSMUA_Achr2P09480_001	Banana	plastid	21.18	15.77
GSMUA_Achr10P...	Banana	cytosol	16.58	14.87

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	Gene3D:3.40.50.300	ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS
InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr8G27540_001
EnsemblPlants:GSMUA_Achr8P27540_001	EnsemblPlants:GSMUA_Achr8T27540_001	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	UniProt:M0TU57
InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410
PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF60	SMART:SM00053	SMART:SM00302
SUPFAM:SSF52540	UniParc:UPI0002961D92	SEG:seg	:	:	:

Description

Dynamin-related protein 5A [Source:GMGC_GENE;Acc:GSMUA_Achr8G27540_001]

Coordinates

chr8:+:30654919..30672313

Molecular Weight (calculated)

68281.5 Da

IEP (calculated)

7.892

GRAVY (calculated)

-0.275

Length

609 amino acids

Sequence
(BLAST)

001: MESLISLVNK LQRACTALGD HGEENALPTL WDSLPAIAVV GGQSSGKSSV LESIVGKDFL PRGSGIVTRR PLVLQLHKID GEREYAEFMH LPRKRFTDFA
101: LVRKEISDET DRETGRSKQI SPVPIHLSIY SPYVVNLTLI DLPGLTKVAV EGQPDSIVAD IENMVRSFIE KPNCIILAIS PANQDLATSD AIKISREVDP
201: KGERTFGVLT KIDLMDKGTD AVDILEGKSY RLQYPWIGVV NRSQADINKN VDMIAARRRE RDYFASTPEY KHLAHRMGSE HLGKVLSKHL EQVIKSRIPG
301: IQSLISKTIA ELDGELSRLG KPIAADAGGK LYAIMEICRI FDQIYKEHLD GVRPGGEKVY NVFDAQLPAA LKRLQFDKQL SMENVRKLIT EADGYQPHLI
401: APEQGYRRLI ESSLVSIRGP AEAAVDTVHA ILKELVHKAI NETLELKQYP TLRVEVGNAA FESLERMREE SRKATLKLVD MECSYLTVDF FRKLPQDIEK
501: GGNPTLSIFD RYNDSYLRRI GTTVLAYVNM VCSSLRNSIP KSIVYCQVRE AKRSLLDHFF TELGKKETKQ LGSLLDEDPA IMERRTALAK RLELYRGAQA
601: EIDAVAWAK

Best Arabidopsis Sequence Match ( AT5G42080.1 )
(BLAST)

001: MENLISLVNK IQRACTALGD HGDSSALPTL WDSLPAIAVV GGQSSGKSSV LESIVGKDFL PRGSGIVTRR PLVLQLQKID DGTREYAEFL HLPRKKFTDF
101: AAVRKEIQDE TDRETGRSKA ISSVPIHLSI YSPNVVNLTL IDLPGLTKVA VDGQSDSIVK DIENMVRSYI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PSGDRTFGVL TKIDLMDKGT DAVEILEGRS FKLKYPWVGV VNRSQADINK NVDMIAARKR EREYFSNTTE YRHLANKMGS EHLAKMLSKH LERVIKSRIP
301: GIQSLINKTV LELETELSRL GKPIAADAGG KLYSIMEICR LFDQIFKEHL DGVRAGGEKV YNVFDNQLPA ALKRLQFDKQ LAMDNIRKLV TEADGYQPHL
401: IAPEQGYRRL IESSIVSIRG PAEASVDTVH AILKDLVHKS VNETVELKQY PALRVEVTNA AIESLDKMRE GSKKATLQLV DMECSYLTVD FFRKLPQDVE
501: KGGNPTHSIF DRYNDSYLRR IGSNVLSYVN MVCAGLRNSI PKSIVYCQVR EAKRSLLDHF FAELGTMDMK RLSSLLNEDP AIMERRSAIS KRLELYRAAQ
601: SEIDAVAWSK

Arabidopsis Description

DRP1ARSW9 [Source:UniProtKB/TrEMBL;Acc:A0A178UEJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.