Factsheet for GSMUA_Achr6P26600_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P27540_001	Banana	cytosol	94.09	94.09
VIT_02s0025g01570.t01	Wine grape	cytosol, extracellular	89.0	89.0
GSMUA_Achr1P04880_001	Banana	cytosol	89.0	88.85
Os05t0556100-01	Rice	plasma membrane	88.34	88.34
EES19921	Sorghum	cytosol	87.36	87.36
TraesCS1D01G393000.2	Wheat	cytosol	86.7	86.7
TraesCS1B01G411700.3	Wheat	cytosol	86.7	86.7
TraesCS1A01G385400.2	Wheat	cytosol, golgi, nucleus, unclear	86.7	86.7
EES01270	Sorghum	cytosol	84.89	84.89
Os01t0681100-01	Rice	cytosol, plasma membrane	24.79	82.07
Zm00001d009504_P002	Maize	cytosol	87.36	81.1
Zm00001d038955_P001	Maize	cytosol, mitochondrion, plasma membrane	87.36	79.4
HORVU1Hr1G084970.2	Barley	plasma membrane	86.86	78.25
GSMUA_Achr2P18210_001	Banana	cytosol	74.22	73.98
GSMUA_Achr11P...	Banana	cytosol	74.06	73.45
GSMUA_Achr2P21630_001	Banana	cytosol	71.92	71.92
GSMUA_AchrUn_...	Banana	cytosol	73.89	71.54
GSMUA_Achr7P11190_001	Banana	cytosol	71.43	71.08
TraesCS6B01G443600.1	Wheat	cytosol	41.38	48.18
TraesCS6D01G385300.1	Wheat	cytosol	36.45	44.85
GSMUA_Achr10P...	Banana	cytosol	36.62	28.48
GSMUA_Achr8P08760_001	Banana	cytosol	30.38	24.03
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	21.84	23.88
GSMUA_Achr1P18350_001	Banana	cytosol	28.08	19.13
GSMUA_Achr4P20040_001	Banana	cytosol	27.91	18.5
GSMUA_Achr3P01090_001	Banana	nucleus	27.59	18.3
GSMUA_Achr7P05530_001	Banana	nucleus	27.59	18.24
GSMUA_Achr2P09480_001	Banana	plastid	22.0	16.38
GSMUA_Achr10P...	Banana	cytosol	16.26	14.58

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	Gene3D:3.40.50.300	ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS
InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G26600_001
EnsemblPlants:GSMUA_Achr6P26600_001	EnsemblPlants:GSMUA_Achr6T26600_001	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	UniProt:M0TAF5
InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410
PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF58	SMART:SM00053	SMART:SM00302
SUPFAM:SSF52540	UniParc:UPI00029656CF	SEG:seg	:	:	:

Description

Dynamin-related protein 5A [Source:GMGC_GENE;Acc:GSMUA_Achr6G26600_001]

Coordinates

chr6:-:27285729..27300531

Molecular Weight (calculated)

68319.5 Da

IEP (calculated)

7.901

GRAVY (calculated)

-0.310

Length

609 amino acids

Sequence
(BLAST)

001: MESLISLVNR LQRACTALGD HGEESALPTL WDSLPTIAVV GGQSSGKSSV LESIVGKDFL PRGSGIVTRR PLVLQLHKID GEREYAEFMH LPRKRFTDFA
101: LVRKEIQDET DRETGRTKQI SPVPIHLSIY SPNVVNLTLI DLPGLTKVAV EGQPDSVVAE IENMVRSYIE KPNCIILAIS PANQDLATSD AIKMSREVDP
201: KGERTFGVLT KIDLMDKGTD AVDILEGKSY RLQYPWIGIV NRSQADINKN VDMIAARRRE REYFANTPEY KHLAHRMGSE HLGKILSKHL EQVIKSRIPG
301: IQSLINKTIA ELEGELNRLG KPIAADAGGK LYAIVEICRI FDQIYKEHLD GVRPGGEKVY NVFDAQLPAA LKRLQFDKHL SMENVRKLIT EADGYQPHLI
401: APEQGYRRLI ESSLVSIRGP ADASVDAVHA ILKDLVHKAI NETPELKQYP TLRVEVANAA FESLERMREE SRKATLKLVD MECSYLTVDF FRKLPQDVEK
501: GGNPAQSIFD RYNDSYLRRI GTTVLAYVNM VCASLRNSIP KSIVYCQVRE AKRSLLDHFL TELGKKEAKQ LGSMLDEDPA IMERRAALAK RLELYKSAQA
601: EIDAVAWSK

Best Arabidopsis Sequence Match ( AT5G42080.1 )
(BLAST)

001: MENLISLVNK IQRACTALGD HGDSSALPTL WDSLPAIAVV GGQSSGKSSV LESIVGKDFL PRGSGIVTRR PLVLQLQKID DGTREYAEFL HLPRKKFTDF
101: AAVRKEIQDE TDRETGRSKA ISSVPIHLSI YSPNVVNLTL IDLPGLTKVA VDGQSDSIVK DIENMVRSYI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PSGDRTFGVL TKIDLMDKGT DAVEILEGRS FKLKYPWVGV VNRSQADINK NVDMIAARKR EREYFSNTTE YRHLANKMGS EHLAKMLSKH LERVIKSRIP
301: GIQSLINKTV LELETELSRL GKPIAADAGG KLYSIMEICR LFDQIFKEHL DGVRAGGEKV YNVFDNQLPA ALKRLQFDKQ LAMDNIRKLV TEADGYQPHL
401: IAPEQGYRRL IESSIVSIRG PAEASVDTVH AILKDLVHKS VNETVELKQY PALRVEVTNA AIESLDKMRE GSKKATLQLV DMECSYLTVD FFRKLPQDVE
501: KGGNPTHSIF DRYNDSYLRR IGSNVLSYVN MVCAGLRNSI PKSIVYCQVR EAKRSLLDHF FAELGTMDMK RLSSLLNEDP AIMERRSAIS KRLELYRAAQ
601: SEIDAVAWSK

Arabidopsis Description

DRP1ARSW9 [Source:UniProtKB/TrEMBL;Acc:A0A178UEJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.