Factsheet for Zm00001d004012_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU81360	Sorghum	cytosol	58.78	85.05
TraesCS2D01G279900.2	Wheat	cytosol	49.91	70.36
TraesCS2A01G281000.2	Wheat	cytosol	49.73	70.19
TraesCS2B01G298400.1	Wheat	cytosol	49.82	69.87
HORVU2Hr1G068810.3	Barley	cytosol	50.09	68.84
Os04t0381000-01	Rice	cytosol	50.73	68.35
Solyc11g043200.1.1	Tomato	cytosol, nucleus	13.99	66.81
GSMUA_Achr8P08760_001	Banana	cytosol	38.39	54.55
Zm00001d042338_P002	Maize	extracellular, mitochondrion	39.95	53.49
KRH42074	Soybean	endoplasmic reticulum, nucleus	39.21	52.7
VIT_03s0038g00970.t01	Wine grape	cytosol	40.22	52.69
KRH10618	Soybean	plastid	39.49	52.49
KRH49844	Soybean	plastid	38.94	52.46
CDY46101	Canola	cytosol	38.39	52.3
Solyc01g106050.2.1	Tomato	plastid	39.21	52.19
KRH21736	Soybean	nucleus	39.4	52.18
Zm00001d012027_P002	Maize	cytosol	40.49	52.12
Bra036991.1-P	Field mustard	cytosol	38.3	51.92
Bra011458.1-P	Field mustard	cytosol	38.21	51.8
CDX68994	Canola	cytosol	38.12	51.29
CDY48440	Canola	cytosol	37.57	50.93
Bra034579.1-P	Field mustard	cytosol	37.57	50.93
CDY28314	Canola	cytosol	37.48	50.87
CDX72418	Canola	cytosol	38.3	50.42
CDX75370	Canola	cytosol	38.48	50.12
AT4G33650.2	Thale cress	cytosol	37.02	50.06
KRH62781	Soybean	nucleus	37.29	49.94
AT2G14120.3	Thale cress	cytosol, plastid	36.93	49.94
Solyc11g043210.1.1	Tomato	nucleus	21.02	41.74
Zm00001d013426_P002	Maize	plasma membrane	18.19	32.57
Zm00001d033751_P003	Maize	plasma membrane	18.1	32.41
Zm00001d009504_P002	Maize	cytosol	18.37	30.64
Zm00001d005306_P002	Maize	cytosol, extracellular, mitochondrion	17.37	30.25
Zm00001d038955_P001	Maize	cytosol, mitochondrion, plasma membrane	18.28	29.85
Zm00001d030005_P002	Maize	cytosol, mitochondrion	8.14	22.14
Zm00001d028495_P001	Maize	cytosol	13.16	21.36
Zm00001d028497_P001	Maize	cytosol	11.15	19.55
Zm00001d023583_P005	Maize	plastid	11.24	16.23
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	12.8	15.33
Zm00001d017979_P002	Maize	extracellular, mitochondrion	12.89	15.31
Zm00001d037279_P005	Maize	plasma membrane	12.71	15.22
Zm00001d043451_P001	Maize	plastid	10.15	13.49
Zm00001d012752_P006	Maize	plastid	10.33	13.47
Zm00001d032256_P001	Maize	cytosol	11.33	13.33
Zm00001d051815_P002	Maize	cytosol	3.38	6.74

Protein Annotations

Gene3D:1.20.120.1240	MapMan:13.6.2.1	Gene3D:3.40.50.300	Gene3D:3.60.10.10	UniProt:A0A1D6ECY4	InterPro:Dynamin_GTPase
InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:Endo/exonu/phosph_ase_sf	InterPro:GED	InterPro:GED_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	InterPro:IPR036691	ProteinID:ONM18162.1	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718
PANTHER:PTHR11566	PANTHER:PTHR11566:SF62	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	SUPFAM:SSF56219
UniParc:UPI000844D81F	EnsemblPlantsGene:Zm00001d004012	EnsemblPlants:Zm00001d004012_P001	EnsemblPlants:Zm00001d004012_T001	SEG:seg	:

Description

Dynamin-related protein 3A

Coordinates

chr2:+:75641850..75675408

Molecular Weight (calculated)

123500.0 Da

IEP (calculated)

8.676

GRAVY (calculated)

-0.288

Length

1094 amino acids

Sequence
(BLAST)

0001: MPNPGAAVPE TVGQAVIPLI NGLQDIIARL DGDAAAGLEL PQVAAIGGQS SGKSSVLEAL VGRDFLPRGP DICTRRPLVL QLVRHAAPEE WGEFLHVPGR
0101: QFHDFEQIKR EIQLETDKEA GDNKGVSEKQ IRLKIFSPNV LDITLVDLPG ITRVPVGDQP SDIESRIRAM IMQYIKHPSC IILAVSPANA DLANSDALQL
0201: ARLADPDGSR TIGVITKLDI MDRGTDARNF LLGNVIPLKF GYVGVVNRSQ EDINFNRSVK DALAFEEKYF LTLPAYHGLA HCCGVPQLAK KLNMILLKHV
0301: TNMLPGLKTR INAQLVAVAK EHAAYGDTVE SVPFLPWWKG KTGCLQINFL VEQGYTTFFS QYLSRVWRCR WGTSPHPAEF FRGTQHLILP AGWISGEVGA
0401: AFVVACRVDQ WRSWSCFRCG VGQSFAVMTC CVHFLWSLGL LVSRWRRVRA LADVRCGKSE QLIIITCDKF RNDDVRWALS VEIDPCKSIS DEDIRTTIQN
0501: SGGPKGAMFL PEVPFEILVR KQIGRLLDPS LQCAQFIYDE LIKISHSCLI SELQKFPALK KRLSEVVCSF LRDGLRPAET MITHIIEMEA SKLRELAEAA
0601: SRRRINILCV QETKWKGQKV KEVENIGFKL WYSGAVANKN GVGILIDKSL KDGVVDVKRQ GDRINLVKLV LGDVVLNIIS AYAPQEGGVR GVWSDQRERM
0701: EPKDTWWWTK DVQKAIKEKK ECYMSLFHDR SAVNIERYKV AKKTTKRAMN KSMGRAYDDL YRRLSTNEGE KDVYKMARIR ERKTRDLNQV KCIKDEMNQL
0801: LMKGQDIKQR WQLYFDNLFD GENETMDTQL DDFFDDLNRC FVRRIQESEV KEALKRMKGG KAMGQRMDYI NTSHPSFVGG TKVVELAKHE VLPPKTSASL
0901: SGRKASVEAE TSLTGGNQIG NSQVGESSSK LPSIIPLKEP PITLKPSETE QDATEVAVVK LLIKSYYDIV RKNIEDAIPK AVMHFLVNHT KRDLHNFLIR
1001: KLYRENLLNE LMRETDEVLM RRQRIQEMLE ILEQAHRTLE EFPFEVDKLE KGYNLTEHAT GLSKIHGVSG DSTNVIYTSS PNCYSPHRAS HMVL

Best Arabidopsis Sequence Match ( AT2G14120.1 )
(BLAST)

001: MSVDDLPPSS ASAVTPLGSS VIPIVNKLQD IFAQLGSQST IALPQVAVVG SQSSGKSSVL EALVGRDFLP RGNDICTRRP LRLQLVQTKP SSDGGSDEEW
101: GEFLHHDPVR RIYDFSEIRR EIEAETNRVS GENKGVSDIP IGLKIFSPNV LDISLVDLPG ITKVPVGDQP SDIEARIRTM ILTYIKEPSC LILAVSPANT
201: DLANSDALQI AGNADPDGHR TIGVITKLDI MDRGTDARNH LLGKTIPLRL GYVGVVNRSQ EDILMNRSIK DALVAEEKFF RSRPVYSGLT DRLGVPQLAK
301: KLNQVLVQHI KALLPSLKSR INNALFATAK EYESYGDITE SRGGQGALLL SFITKYCEAY SSTLEGKSKE MSTSELSGGA RILYIFQSVF VKSLEEVDPC
401: EDLTADDIRT AIQNATGPRS ALFVPDVPFE VLVRRQISRL LDPSLQCARF IFDELVKISH QCMMKELQRF PVLQKRMDEV IGNFLREGLE PSQAMIRDLI
501: EMEMDYINTS HPNFIGGTKA VEQAMQTVKS SRIPHPVARP RDTVEPERTA SSGSQIKTRS FLGRQANGII TDQAVPTAAD AERPAPAGST SWSGFSSIFR
601: GSDGQAAAKN NLLNKPFSET TQEVYQNLST IYLKEPPTIL KSSETHSEQE SVEIEITKLL LKSYYDIVRK NVEDLVPKAI MHFLVNYTKR ELHNVFIEKL
701: YRENLIEELL KEPDELAIKR KRTQETLRIL QQANRTLDEL PLEAESVERG YKIGSEAKHE ELPGTRRSRT ETNGNGRLHM

Arabidopsis Description

DRP3BDynamin related protein [Source:UniProtKB/TrEMBL;Acc:F4IFG2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.