Factsheet for Zm00001d042338_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

plastid 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04116	Sorghum	cytosol	97.67	97.44
Zm00001d012027_P002	Maize	cytosol	96.7	92.94
Os01t0920400-01	Rice	nucleus, plastid	87.52	87.41
TraesCS3B01G465100.3	Wheat	cytosol, plastid	84.94	86.32
TraesCS3A01G428000.2	Wheat	cytosol, plastid	83.84	85.62
TraesCS3D01G423500.1	Wheat	cytosol	85.19	85.4
HORVU3Hr1G094260.4	Barley	cytosol	85.07	85.28
TraesCS5D01G082000.4	Wheat	cytosol	66.34	79.12
GSMUA_Achr10P...	Banana	cytosol	69.16	72.16
Solyc11g043200.1.1	Tomato	cytosol, nucleus	19.34	69.0
Solyc01g106050.2.1	Tomato	plastid	69.28	68.86
KRH10618	Soybean	plastid	69.16	68.65
KRH21736	Soybean	nucleus	69.16	68.4
VIT_03s0038g00970.t01	Wine grape	cytosol	69.77	68.26
KRH42074	Soybean	endoplasmic reticulum, nucleus	67.44	67.69
KRH49844	Soybean	plastid	67.2	67.61
KRH62781	Soybean	nucleus	65.61	65.61
Bra011458.1-P	Field mustard	cytosol	64.5	65.3
CDY46101	Canola	cytosol	64.01	65.13
CDX68994	Canola	cytosol	64.75	65.07
Bra036991.1-P	Field mustard	cytosol	63.65	64.44
AT4G33650.2	Thale cress	cytosol	63.77	64.4
CDY28314	Canola	cytosol	63.16	64.02
CDY48440	Canola	cytosol	63.16	63.94
Bra034579.1-P	Field mustard	cytosol	63.16	63.94
AT2G14120.3	Thale cress	cytosol, plastid	63.28	63.91
CDX72418	Canola	cytosol	63.89	62.82
CDX75370	Canola	cytosol	64.5	62.74
Solyc11g043210.1.1	Tomato	nucleus	42.11	62.43
Zm00001d004012_P001	Maize	cytosol	53.49	39.95
Zm00001d013426_P002	Maize	plasma membrane	26.68	35.68
Zm00001d033751_P003	Maize	plasma membrane	26.44	35.35
Zm00001d009504_P002	Maize	cytosol	27.66	34.45
Zm00001d005306_P002	Maize	cytosol, extracellular, mitochondrion	25.95	33.76
Zm00001d038955_P001	Maize	cytosol, mitochondrion, plasma membrane	27.42	33.43
Zm00001d030005_P002	Maize	cytosol, mitochondrion	12.97	26.37
Zm00001d028495_P001	Maize	cytosol	20.81	25.22
Zm00001d028497_P001	Maize	cytosol	17.63	23.08
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	19.95	17.85
Zm00001d037279_P005	Maize	plasma membrane	19.83	17.74
Zm00001d017979_P002	Maize	extracellular, mitochondrion	19.95	17.7
Zm00001d023583_P005	Maize	plastid	16.28	17.55
Zm00001d043451_P001	Maize	plastid	16.03	15.92
Zm00001d012752_P006	Maize	plastid	15.42	15.02
Zm00001d032256_P001	Maize	cytosol	16.65	14.62
Zm00001d051815_P002	Maize	cytosol	7.71	11.48

Protein Annotations

Gene3D:1.20.120.1240	EntrezGene:100383931	MapMan:13.6.2.1	Gene3D:2.30.29.30	Gene3D:3.40.50.300	UniProt:A0A1D6N309
ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED
InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR011993	InterPro:IPR020850	InterPro:IPR030381
ProteinID:ONM35085.1	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	InterPro:PH-like_dom_sf
PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF62
SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	UniParc:UPI000221FA83	EnsemblPlantsGene:Zm00001d042338	EnsemblPlants:Zm00001d042338_P002
EnsemblPlants:Zm00001d042338_T002	SEG:seg	:	:	:	:

Description

Dynamin-related protein 3A

Coordinates

chr3:+:162007289..162018460

Molecular Weight (calculated)

89983.5 Da

IEP (calculated)

7.073

GRAVY (calculated)

-0.308

Length

817 amino acids

Sequence
(BLAST)

001: MAEDHLSSAP SAPSAAAAAA AAAVGSSVIP IVNKLQDIFA QLGSSSTIDL PQVAVVGSQS SGKSSVLEAL VGRDFLPRGS DICTRRPLVL QLVHQPRRPA
101: DAEADEWGEF LHLSGRRFYD FREIRREIQA ETDREAGGNK GVSDRQIRLK IFSPNVLNIT LVDLPGITKV PVGDQPTDIE ARIRTMIMSY IRHKTCIILA
201: VSPANADLAN SDALQMARVA DPDGSRTIGV ITKLDIMDRG TDARNFLLGN VIPLKLGYVG VVNRSQQDIN SDLSIKDALA REEKFFRTQP AYHGIAQYCG
301: IPQLAKKLNQ ILVQHIKTVL PGLKSRISSQ LTAVAKELAV YGDPVDSKAG QGAKLLNILA KYCEAFSSMV EGKNEDISTI ELSGGARIHY IFQSIFVKSL
401: EEVDPCEDVT DEDIRMAIQN ATGPRSALFV PEVPFEVLVR RQISRLLDPS LQCAQFIYDE LVKMSHRCLA MELQQFPILR RSMDEVIGKF LRDGLKPAEN
501: MIAHIIEMEE DYINTSHPNF IGGSKAVEQA QQQVRSAKMS AAVVRKDGVD AQASEKTQKS RAILGRSGVN GVVTDHIQGV RPAAEAERPG SSGSGSTSFW
601: NQIFTSNEDR THPPARDNTT NKSYAVPAPN LEHSFSTIQL REPPVVLKPS EHQSEQEALE IAITKLLLKS YYNIVRKNVE DLIPKAVMHF LVNHTKRALH
701: NYLITKLYRD DLLEDLLKEP DEITIKRKQI RENLKVLQQA YKTLDEIPLD AEAVERGGYS LDSDAIGLPR AHGLSSSLHG FNDGSSPYST PKQSRSRRSN
801: HSGEQLPFNP NMSGNGF

Best Arabidopsis Sequence Match ( AT4G33650.1 )
(BLAST)

001: MTIEEVSGET PPSTPPSSST PSPSSSTTNA APLGSSVIPI VNKLQDIFAQ LGSQSTIALP QVVVVGSQSS GKSSVLEALV GRDFLPRGND ICTRRPLVLQ
101: LLQTKSRANG GSDDEWGEFR HLPETRFYDF SEIRREIEAE TNRLVGENKG VADTQIRLKI SSPNVLNITL VDLPGITKVP VGDQPSDIEA RIRTMILSYI
201: KQDTCLILAV TPANTDLANS DALQIASIVD PDGHRTIGVI TKLDIMDKGT DARKLLLGNV VPLRLGYVGV VNRCQEDILL NRTVKEALLA EEKFFRSHPV
301: YHGLADRLGV PQLAKKLNQI LVQHIKVLLP DLKSRISNAL VATAKEHQSY GELTESRAGQ GALLLNFLSK YCEAYSSLLE GKSEEMSTSE LSGGARIHYI
401: FQSIFVKSLE EVDPCEDLTD DDIRTAIQNA TGPRSALFVP DVPFEVLVRR QISRLLDPSL QCARFIFEEL IKISHRCMMN ELQRFPVLRK RMDEVIGDFL
501: REGLEPSEAM IGDIIDMEMD YINTSHPNFI GGTKAVEAAM HQVKSSRIPH PVARPKDTVE PDRTSSSTSQ VKSRSFLGRQ ANGIVTDQGV VSADAEKAQP
601: AANASDTRWG IPSIFRGGDT RAVTKDSLLN KPFSEAVEDM SHNLSMIYLK EPPAVLRPTE THSEQEAVEI QITKLLLRSY YDIVRKNIED SVPKAIMHFL
701: VNHTKRELHN VFIKKLYREN LFEEMLQEPD EIAVKRKRTQ ETLHVLQQAY RTLDELPLEA DSVSAGMSKH QELLTSSKYS TSSSYSASPS TTRRSRRAGD
801: QHQNGYGF

Arabidopsis Description

DRP3ANOXY15 [Source:UniProtKB/TrEMBL;Acc:A0A178UUQ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.