Factsheet for TraesCS5D01G082000.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G423500.1	Wheat	cytosol	84.82	71.29
Os01t0920400-01	Rice	nucleus, plastid	79.71	66.75
Zm00001d042338_P002	Maize	extracellular, mitochondrion	79.12	66.34
EES04116	Sorghum	cytosol	78.54	65.69
Zm00001d012027_P002	Maize	cytosol	78.98	63.65
Solyc11g043200.1.1	Tomato	cytosol, nucleus	20.58	61.57
GSMUA_Achr10P...	Banana	cytosol	65.11	56.96
VIT_03s0038g00970.t01	Wine grape	cytosol	64.96	53.29
Solyc01g106050.2.1	Tomato	plastid	63.21	52.68
Bra011458.1-P	Field mustard	cytosol	62.04	52.66
KRH10618	Soybean	plastid	62.92	52.37
KRH42074	Soybean	endoplasmic reticulum, nucleus	62.19	52.33
KRH21736	Soybean	nucleus	62.92	52.18
CDY46101	Canola	cytosol	61.02	52.05
CDX68994	Canola	cytosol	61.75	52.03
KRH49844	Soybean	plastid	61.61	51.97
Bra036991.1-P	Field mustard	cytosol	61.02	51.8
CDY48440	Canola	cytosol	60.73	51.55
Bra034579.1-P	Field mustard	cytosol	60.73	51.55
AT4G33650.2	Thale cress	cytosol	60.88	51.55
CDY28314	Canola	cytosol	60.44	51.36
AT2G14120.3	Thale cress	cytosol, plastid	60.58	51.3
CDX75370	Canola	cytosol	62.04	50.6
KRH62781	Soybean	nucleus	60.29	50.55
CDX72418	Canola	cytosol	60.88	50.18
TraesCS2D01G279900.2	Wheat	cytosol	56.5	49.87
Solyc11g043210.1.1	Tomato	nucleus	34.74	43.19
TraesCS1D01G393000.2	Wheat	cytosol	27.74	31.2
TraesCS1D01G216700.2	Wheat	cytosol	27.59	30.24
TraesCS4D01G047600.1	Wheat	golgi, nucleus, unclear	26.72	30.0
TraesCS6D01G385300.1	Wheat	cytosol	18.69	25.86
TraesCS4D01G098800.1	Wheat	cytosol	21.31	21.34
TraesCS4D01G217900.1	Wheat	cytosol	20.44	21.12
TraesCS5D01G124800.1	Wheat	cytosol	16.5	14.62
TraesCS7D01G200900.1	Wheat	golgi, unclear	18.98	14.4
TraesCS6D01G291700.1	Wheat	nucleus	18.1	13.73
TraesCS3D01G272800.1	Wheat	plastid	16.2	13.59

Protein Annotations

Gene3D:1.20.120.1240	MapMan:13.6.2.1	Gene3D:2.30.29.30	Gene3D:3.40.50.300	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS
InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom
InterPro:IPR011993	InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031
PFAM:PF02212	InterPro:PH-like_dom_sf	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388	PFscan:PS51718
PANTHER:PTHR11566	PANTHER:PTHR11566:SF62	SMART:SM00053	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS5D01G082000	EnsemblPlants:TraesCS5D01G082000.4
TIGR:cd08771	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:82946070..82954518

Molecular Weight (calculated)

75340.4 Da

IEP (calculated)

7.455

GRAVY (calculated)

-0.173

Length

685 amino acids

Sequence
(BLAST)

001: MADDHYNSSA AAAAAVGCSV IPIDNKLQGI FSQLGSSSTI DLPHVAVVGS QSNGKSSILK ALLGRDFLPR GSDMCTRRPL VLQLVHQARR PADAEADEWG
101: EFLHHPGRRY YDFREIRREI QAETGREAGG NKGVSDRQIR LKIHSPNVLN ITLVDLPGVT KVPAVAPTDI EARIRTMIFS YMKHKACIIL AVLPANADLA
201: NSGALQIART ADPDGSRTIG VTTKLDIMDR GTDACNFLLE TVIPLRLRYV GIVNRSQQDI NTDISAKEVL AREENFFRTQ SAYSGLTKYC GIPRLAKKLN
301: QILVQHIRTI LPGLKSHISS QLAAITKEHA FYGDPIEAKA GQAAKFLNIL AKFCDAFSSM VEGKNEDIST IELSGGAHIH YIFQSIFVKS LEGVDPCEDV
401: TDEDTRMAIK NATGPRSALF VPEVPFEVLV HRQIRLLDPS LQCADFICEG LVKMIQLCLC NELQQFPTLR RSMDEVIVKF ILDGLKPAQD MIAHIIEMEA
501: DYINTSHPSF IGGSKAIVQA HLQVRTARLP AMVVRRDGDA DGPQDSERTR KSHALLGRTT GVNGIITEQI QGVRPAAGAE RPGSSGSGST SFWGSIFTSS
601: EDRKHSSARD SSVNKSYASA TPYLEHSFSS IQLKEKQLPL VPSESHSEQE DLEITFTKLL LQSYYNIVKK NVEDFIPKAI IRFLV

Best Arabidopsis Sequence Match ( AT2G14120.1 )
(BLAST)

001: MSVDDLPPSS ASAVTPLGSS VIPIVNKLQD IFAQLGSQST IALPQVAVVG SQSSGKSSVL EALVGRDFLP RGNDICTRRP LRLQLVQTKP SSDGGSDEEW
101: GEFLHHDPVR RIYDFSEIRR EIEAETNRVS GENKGVSDIP IGLKIFSPNV LDISLVDLPG ITKVPVGDQP SDIEARIRTM ILTYIKEPSC LILAVSPANT
201: DLANSDALQI AGNADPDGHR TIGVITKLDI MDRGTDARNH LLGKTIPLRL GYVGVVNRSQ EDILMNRSIK DALVAEEKFF RSRPVYSGLT DRLGVPQLAK
301: KLNQVLVQHI KALLPSLKSR INNALFATAK EYESYGDITE SRGGQGALLL SFITKYCEAY SSTLEGKSKE MSTSELSGGA RILYIFQSVF VKSLEEVDPC
401: EDLTADDIRT AIQNATGPRS ALFVPDVPFE VLVRRQISRL LDPSLQCARF IFDELVKISH QCMMKELQRF PVLQKRMDEV IGNFLREGLE PSQAMIRDLI
501: EMEMDYINTS HPNFIGGTKA VEQAMQTVKS SRIPHPVARP RDTVEPERTA SSGSQIKTRS FLGRQANGII TDQAVPTAAD AERPAPAGST SWSGFSSIFR
601: GSDGQAAAKN NLLNKPFSET TQEVYQNLST IYLKEPPTIL KSSETHSEQE SVEIEITKLL LKSYYDIVRK NVEDLVPKAI MHFLVNYTKR ELHNVFIEKL
701: YRENLIEELL KEPDELAIKR KRTQETLRIL QQANRTLDEL PLEAESVERG YKIGSEAKHE ELPGTRRSRT ETNGNGRLHM

Arabidopsis Description

DRP3BDynamin related protein [Source:UniProtKB/TrEMBL;Acc:F4IFG2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.