Factsheet for TraesCS3D01G272800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G273500.1	Wheat	plastid	99.39	99.39
TraesCS3B01G307100.1	Wheat	plastid	98.29	98.29
HORVU2Hr1G095510.1	Barley	cytosol	10.28	95.45
HORVU2Hr1G095500.1	Barley	cytosol	13.46	93.22
HORVU3Hr1G071340.9	Barley	cytosol, plastid	97.06	92.42
Os01t0748000-00	Rice	plastid	90.94	90.39
EES03602	Sorghum	plastid	87.76	86.91
Zm00001d043451_P001	Maize	plastid	85.92	85.3
Zm00001d012752_P006	Maize	plastid	82.62	80.45
GSMUA_Achr2P09480_001	Banana	plastid	73.07	72.98
VIT_19s0014g02500.t01	Wine grape	plastid	72.34	70.53
KRH26094	Soybean	plastid	67.93	69.03
KRH55251	Soybean	plastid	66.95	68.81
PGSC0003DMT400032399	Potato	plastid	69.16	68.48
Solyc07g063080.2.1	Tomato	plastid	69.03	68.03
AT1G53140.1	Thale cress	plastid	67.32	67.32
CDY25877	Canola	plastid	67.69	67.19
HORVU1Hr1G001520.1	Barley	cytosol	7.34	66.67
Bra038100.1-P	Field mustard	cytosol	66.71	66.46
CDY29720	Canola	cytosol, extracellular	31.7	60.51
CDY29721	Canola	cytosol	10.89	57.42
CDY50514	Canola	plastid	52.39	55.87
Bra037604.1-P	Field mustard	plastid	51.16	54.29
TraesCS1D01G393000.2	Wheat	cytosol	16.28	21.84
TraesCS4D01G047600.1	Wheat	golgi, nucleus, unclear	15.42	20.66
TraesCS1D01G216700.2	Wheat	cytosol	14.57	19.04
TraesCS6D01G385300.1	Wheat	cytosol	11.26	18.59
TraesCS4D01G098800.1	Wheat	cytosol	14.69	17.54
TraesCS4D01G217900.1	Wheat	cytosol	14.08	17.35
TraesCS3D01G423500.1	Wheat	cytosol	16.77	16.81
TraesCS2D01G279900.2	Wheat	cytosol	15.54	16.37
TraesCS5D01G082000.4	Wheat	cytosol	13.59	16.2
TraesCS5D01G124800.1	Wheat	cytosol	15.06	15.91
TraesCS7D01G200900.1	Wheat	golgi, unclear	12.85	11.63
TraesCS6D01G291700.1	Wheat	nucleus	12.36	11.18

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	GO:GO:0000166	GO:GO:0000911
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0007049	GO:GO:0008150	GO:GO:0009504
GO:GO:0009987	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350
PRINTS:PR00195	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF44	SMART:SM00053	SUPFAM:SSF52540
EnsemblPlantsGene:TraesCS3D01G272800	EnsemblPlants:TraesCS3D01G272800.1	TIGR:cd08771	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:+:378239323..378243252

Molecular Weight (calculated)

90409.7 Da

IEP (calculated)

7.261

GRAVY (calculated)

-0.341

Length

817 amino acids

Sequence
(BLAST)

001: MAMSPAAGRT PNPKAAPSPS PSARRAGADS ASAAAAAAAS DTKARFEAYN RLQAAAVAFG EKLPIPEIVA IGGQSDGKSS LLEALLGFRF NVREVEMGTR
101: RPLVLQMVHD PTALDPRCRF QEEDSEEYGH PMVQAAAIAD LIKQRTESHL RMIQAAVSSK PIVMRAEYAH CPNLTIIDTP GFVLKAKKGE PERTPEEILS
201: MVKTLASPPH RLILFLQQSS VEWCSSLWLD AIREIDPTFR RTMIVISKFD NRLKEFTERW EVDSYLSASG YLGDNIHPFF VALPKDRGTI SNDEFRRQIC
301: QVDIDVLRHL RDGVKGGFNE EKFGPYIGFS CLRKYLESEL QKRYKEAAPA TLALLEQRCS DVSMDVSRLD SKLQATSDVS QLRRSAMLHA ASICTHLRAL
401: LDGAADPAPE VWGKTTEEEQ MHSGINSWPG ISVPVKPPNS SLKLYGGAAF ERVMHEFRCA TYSMECPQVS REKVANILLA HAGRGGSSGM TEAAAEIARA
501: AARSWLAPLT ETACDRLAFV LQSLFDLAME RSRTDDSRYQ NVENMDGYVG FLAALRCSYY KFVKDLSKQC KQIVRHHLDS VTSPYSHICY ESDFLGGVGT
601: VANTLHRFNQ FSGVASFDLS ESGSLEEGQE NLPPRDQQQM TPPAKANERE ILKESQLTVP ETPSPDLPAD MHGGKKKDNG NMNDGGARKR HARMAAYANR
701: SHHNNVTVGG DDLVSRSGSS YSSICSISAQ YFAKMREVLI ERNVPSALNS GFLTPCRERL FLALGFELFA VNDEKFMDMF VSPGAIDCIQ NERQSLLKRQ
801: KILLSCLSEF KNISRTL

Best Arabidopsis Sequence Match ( AT1G53140.1 )
(BLAST)

001: MANSNTYLTT PTKTPSSRRN QQSQSKMQSH SKDPINAESR SRFEAYNRLQ AAAVAFGEKL PIPEIVAIGG QSDGKSSLLE ALLGFRFNVR EVEMGTRRPL
101: ILQMVHDLSA LEPRCRFQDE DSEEYGSPIV SATAVADVIR SRTEALLKKT KTAVSPKPIV MRAEYAHCPN LTIIDTPGFV LKAKKGEPET TPDEILSMVK
201: SLASPPHRIL LFLQQSSVEW CSSLWLDAVR EIDSSFRRTI VVVSKFDNRL KEFSDRGEVD RYLSASGYLG ENTRPYFVAL PKDRSTISND EFRRQISQVD
301: TEVIRHLREG VKGGFDEEKF RSCIGFGSLR DFLESELQKR YKEAAPATLA LLEERCSEVT DDMLRMDMKI QATSDVAHLR KAAMLYTASI SNHVGALIDG
401: AANPAPEQWG KTTEEERGES GIGSWPGVSV DIKPPNAVLK LYGGAAFERV IHEFRCAAYS IECPPVSREK VANILLAHAG RGGGRGVTEA SAEIARTAAR
501: SWLAPLLDTA CDRLAFVLGS LFEIALERNL NQNSEYEKKT ENMDGYVGFH AAVRNCYSRF VKNLAKQCKQ LVRHHLDSVT SPYSMACYEN NYHQGGAFGA
601: YNKFNQASPN SFCFELSDTS RDEPMKDQEN IPPEKNNGQE TTPGKGGESH ITVPETPSPD QPCEIVYGLV KKEIGNGPDG VGARKRMARM VGNRNIEPFR
701: VQNGGLMFAN ADNGMKSSSA YSEICSSAAQ HFARIREVLV ERSVTSTLNS GFLTPCRDRL VVALGLDLFA VNDDKFMDMF VAPGAIVVLQ NERQQLQKRQ
801: KILQSCLTEF KTVARSL

Arabidopsis Description

DRP5ADRP5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBH9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.