Factsheet for Os01t0920400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 19621931
plastid: 27992503
plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G465100.3	Wheat	cytosol, plastid	86.8	88.31
TraesCS3A01G428000.2	Wheat	cytosol, plastid	85.82	87.75
Zm00001d042338_P002	Maize	extracellular, mitochondrion	87.41	87.52
TraesCS3D01G423500.1	Wheat	cytosol	87.16	87.48
HORVU3Hr1G094260.4	Barley	cytosol	86.55	86.87
EES04116	Sorghum	cytosol	86.8	86.69
Zm00001d012027_P002	Maize	cytosol	86.43	83.18
TraesCS5D01G082000.4	Wheat	cytosol	66.75	79.71
GSMUA_Achr10P...	Banana	cytosol	68.58	71.65
VIT_03s0038g00970.t01	Wine grape	cytosol	70.9	69.46
Solyc11g043200.1.1	Tomato	cytosol, nucleus	19.44	69.43
Solyc01g106050.2.1	Tomato	plastid	69.19	68.86
KRH10618	Soybean	plastid	68.95	68.53
KRH49844	Soybean	plastid	67.97	68.47
KRH42074	Soybean	endoplasmic reticulum, nucleus	67.97	68.3
KRH21736	Soybean	nucleus	68.7	68.04
KRH62781	Soybean	nucleus	66.14	66.22
Bra011458.1-P	Field mustard	cytosol	65.28	66.17
CDX68994	Canola	cytosol	65.65	66.05
CDY46101	Canola	cytosol	64.79	66.0
AT4G33650.2	Thale cress	cytosol	64.91	65.64
CDY28314	Canola	cytosol	64.55	65.51
Bra036991.1-P	Field mustard	cytosol	64.43	65.3
Bra034579.1-P	Field mustard	cytosol	64.06	64.93
CDY48440	Canola	cytosol	64.06	64.93
AT2G14120.3	Thale cress	cytosol, plastid	63.69	64.4
CDX75370	Canola	cytosol	65.28	63.57
CDX72418	Canola	cytosol	64.55	63.54
Solyc11g043210.1.1	Tomato	nucleus	42.54	63.16
Os04t0381000-01	Rice	cytosol	61.86	62.32
Os01t0681100-01	Rice	cytosol, plasma membrane	10.88	48.37
Os05t0556100-01	Rice	plasma membrane	27.51	36.95
Os10t0567800-01	Rice	plasma membrane	27.14	35.92
Os03t0713100-01	Rice	plasma membrane	26.41	35.35
Os09t0572900-01	Rice	cytosol, plasma membrane	25.67	33.55
Os03t0260000-01	Rice	cytosol	21.27	25.66
Os04t0129900-01	Rice	cytosol	20.78	24.85
Os12t0178700-01	Rice	cytosol	13.33	19.5
Os06t0247800-01	Rice	plasma membrane	20.17	18.11
Os02t0738900-01	Rice	plasma membrane	20.05	17.77
Os08t0425100-01	Rice	plasma membrane	16.26	17.36
Os01t0748000-00	Rice	plastid	16.75	16.67

Protein Annotations

Gene3D:1.20.120.1240	MapMan:13.6.2.1	Gene3D:2.30.29.30	Gene3D:3.40.50.300	EntrezGene:4327743	ProteinID:BAD87638.1
ProteinID:BAD88362.1	ProteinID:BAF07134.1	ProteinID:BAS75931.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF
InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0000266	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR011993	InterPro:IPR020850	InterPro:IPR030381
EnsemblPlantsGene:Os01g0920400	EnsemblPlants:Os01t0920400-01	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212
InterPro:PH-like_dom_sf	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566
PANTHER:PTHR11566:SF62	UniProt:Q5JJJ5	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	UniParc:UPI00004C2A3A
RefSeq:XP_015614254.1	SEG:seg	:	:	:	:

Description

dynamin-related protein 3ASimilar to Dynamin-related protein 3A (Dynamin-like protein 2) (Dynamin-like protein 2a). Splice isoform 2. (Os01t0920400-01);Hypothetical conserved gene. (Os01t0920400-02)

Coordinates

chr1:-:40182781..40190881

Molecular Weight (calculated)

90038.0 Da

IEP (calculated)

7.016

GRAVY (calculated)

-0.343

Length

818 amino acids

Sequence
(BLAST)

001: MEDGIYSSSA PPSTATAAAA AAAVGSSVIP IVNKLQDIFS QLGSSSTIDL PQVAVVGSQS SGKSSVLEAL VGRDFLPRGS DICTRRPLVL QLVHQPRRPA
101: DAEADEWGEF LHLPGRRFYD FREIRREIQA ETDREAGGNK GVSDKQIRLK IYSPNVLNIT LVDLPGITKV PVGDQPTDIE ARIRTMILSY IKHKTCIILA
201: VSPANADLSN SDALQIARNA DPDGSRTIGV ITKLDIMDRG TDARNFLLGN VIPLRLGYVG VVNRSQQDIK SDLSIKEALA REESFFRNHP AYNGLAQYCG
301: IPQLAKKLNQ ILVQHIKTVL PGLKSRISSQ LTTTAKELSF YGDPVESKAG QGAKLLNILA KYCEAFSSMV EGKNEDISTI ELCGGARIHY IFQSIYVKSL
401: EDVDPCEDVT DEDIRMAIQN ATGPRSALFV PEVPFEVLVR RQISRLLDPS LQCAGFIYDE LVKMSHRCLA VELQQFPLLR RSMDEVIGRF LRDGLKPAQD
501: MIAHIIEMEA DYINTSHPNF IGGSKAVEQA QQQVRSSRLA AVARREGVDA DKSQASDKTQ KPRALLGRTG VNGVVTDHLQ GLRPAAEAER PGSSGSGSTS
601: FWGSISIFSS TSDDRTHSSA KDNSSNKSYT ASTSHLEHSL STIQLREPPV VLKPSESQSE QEALEIAITK LLLKSYYNIV RKNVEDFVPK AIMHFLVNHT
701: KRELHNYLIT KLYRDDLFAD MLREPDEITI KRRQIRDTLK VLQQAYKTLD EIPLEADTVE RGYSLDADAT GLPRAHGLSS SFQDGSSPYS TPKQPRSRKS
801: SHSGEQLPFN PDASGNGF

Best Arabidopsis Sequence Match ( AT4G33650.2 )
(BLAST)

001: MTIEEVSGET PPSTPPSSST PSPSSSTTNA APLGSSVIPI VNKLQDIFAQ LGSQSTIALP QVVVVGSQSS GKSSVLEALV GRDFLPRGND ICTRRPLVLQ
101: LLQTKSRANG GSDDEWGEFR HLPETRFYDF SEIRREIEAE TNRLVGENKG VADTQIRLKI SSPNVLNITL VDLPGITKVP VGDQPSDIEA RIRTMILSYI
201: KQDTCLILAV TPANTDLANS DALQIASIVD PDGHRTIGVI TKLDIMDKGT DARKLLLGNV VPLRLGYVGV VNRCQEDILL NRTVKEALLA EEKFFRSHPV
301: YHGLADRLGV PQLAKKLNQI LVQHIKVLLP DLKSRISNAL VATAKEHQSY GELTESRAGQ GALLLNFLSK YCEAYSSLLE GKSEEMSTSE LSGGARIHYI
401: FQSIFVKSLE EVDPCEDLTD DDIRTAIQNA TGPRSALFVP DVPFEVLVRR QISRLLDPSL QCARFIFEEL IKISHRCMMN ELQRFPVLRK RMDEVIGDFL
501: REGLEPSEAM IGDIIDMEMD YINTSHPNFI GGTKAVEAAM HQVKSSRIPH PVARPKQDTV EPDRTSSSTS QVKSRSFLGR QANGIVTDQG VVSADAEKAQ
601: PAANASDTRW GIPSIFRGGD TRAVTKDSLL NKPFSEAVED MSHNLSMIYL KEPPAVLRPT ETHSEQEAVE IQITKLLLRS YYDIVRKNIE DSVPKAIMHF
701: LVNHTKRELH NVFIKKLYRE NLFEEMLQEP DEIAVKRKRT QETLHVLQQA YRTLDELPLE ADSVSAGMSK HQELLTSSKY STSSSYSASP STTRRSRRAG
801: DQHQNGYGF

Arabidopsis Description

DRP3ANOXY15 [Source:UniProtKB/TrEMBL;Acc:A0A178UUQ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.