CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042338_P002	Maize	extracellular, mitochondrion	97.44	97.67
Zm00001d012027_P002	Maize	cytosol	96.58	93.06
Os01t0920400-01	Rice	nucleus, plastid	86.69	86.8
TraesCS3B01G465100.3	Wheat	cytosol, plastid	84.25	85.82
TraesCS3D01G423500.1	Wheat	cytosol	84.49	84.91
TraesCS3A01G428000.2	Wheat	cytosol, plastid	82.91	84.88
HORVU3Hr1G094260.4	Barley	cytosol	84.37	84.79
TraesCS5D01G082000.4	Wheat	cytosol	65.69	78.54
GSMUA_Achr10P...	Banana	cytosol	68.5	71.65
Solyc11g043200.1.1	Tomato	cytosol, nucleus	19.41	69.43
Solyc01g106050.2.1	Tomato	plastid	68.99	68.73
KRH10618	Soybean	plastid	68.62	68.29
KRH21736	Soybean	nucleus	68.74	68.16
VIT_03s0038g00970.t01	Wine grape	cytosol	69.35	68.02
KRH42074	Soybean	endoplasmic reticulum, nucleus	67.52	67.94
KRH49844	Soybean	plastid	67.03	67.61
Bra011458.1-P	Field mustard	cytosol	64.35	65.3
CDX68994	Canola	cytosol	64.59	65.07
KRH62781	Soybean	nucleus	64.84	64.99
CDY46101	Canola	cytosol	63.49	64.76
AT4G33650.2	Thale cress	cytosol	63.74	64.52
Bra036991.1-P	Field mustard	cytosol	63.13	64.06
CDY28314	Canola	cytosol	62.88	63.9
CDY48440	Canola	cytosol	62.88	63.82
Bra034579.1-P	Field mustard	cytosol	62.88	63.82
AT2G14120.3	Thale cress	cytosol, plastid	62.88	63.66
OQU81360	Sorghum	cytosol	58.0	62.83
CDX75370	Canola	cytosol	64.35	62.74
CDX72418	Canola	cytosol	63.37	62.45
Solyc11g043210.1.1	Tomato	nucleus	42.0	62.43
EES19921	Sorghum	cytosol	27.84	37.44
EES01270	Sorghum	cytosol	27.84	37.44
KXG37727	Sorghum	cytosol, mitochondrion	26.74	35.78
KXG38886	Sorghum	cytosol	26.98	35.08
EER98546	Sorghum	cytosol	26.13	34.29
EER95148	Sorghum	cytosol	20.88	25.26
KXG39737	Sorghum	cytosol	20.02	25.08
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	20.02	17.96
EES16755	Sorghum	cytosol	16.48	17.83
EES05560	Sorghum	nucleus	19.66	17.48
KXG25176	Sorghum	cytosol	15.75	17.15
EES03602	Sorghum	plastid	16.73	16.61

Protein Annotations

Gene3D:1.20.120.1240	MapMan:13.6.2.1	Gene3D:2.30.29.30	Gene3D:3.40.50.300	EntrezGene:8079795	UniProt:C5XGA4
ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central	EnsemblPlants:EES04116
ProteinID:EES04116	ProteinID:EES04116.1	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0000266
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR011993	InterPro:IPR020850
InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	InterPro:PH-like_dom_sf
PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF62
SMART:SM00053	SMART:SM00302	EnsemblPlantsGene:SORBI_3003G404500	SUPFAM:SSF52540	unigene:Sbi.7131	UniParc:UPI0001A855B7
RefSeq:XP_002458996.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:71208317..71215607

Molecular Weight (calculated)

90091.5 Da

IEP (calculated)

7.073

GRAVY (calculated)

-0.301

Length

819 amino acids

Sequence
(BLAST)

001: MAEDHFSSAP SAPSAAATAA AAAAAAVGSS VIPIVNKLQD IFAQLGSSST IDLPQVAVVG SQSSGKSSVL EALVGRDFLP RGSDICTRRP LVLQLVHQPR
101: RPADAEADEW GEFLHLSGRR FYDFREIRRE IQAETDREAG GNKGVSDRQI RLKIFSPNVL NITLVDLPGI TKVPVGDQPT DIEARIRTMI MSYIRHKTCI
201: ILAVSPANAD LANSDALQMA RVADPDGSRT IGVITKLDIM DRGTDARNFL LGNVIPLKLG YVGVVNRSQQ DINSDLSIKD ALAREEKFFR TQPAYHGLAQ
301: YCGIPQLAKK LNQILVQHIK TVLPGLKSRI SSQLTAVAKE LAVYGDPVDS KAGQGAKLLN ILAKYCEAFS SMVEGKNEDI STIELSGGAR IHYIFQSIFV
401: KSLEEVDPCE DVTDEDIRMA IQNATGPRSA LFVPEVPFEV LVRRQISRLL DPSLQCAQFI YDELVKMSHR CLATELQQFP ILRRSMDEVI GKFLRDGLKP
501: AESMIAHIIE MEEDYINTSH PNFIGGSKAV EQAQQQVRSA KMSAAVRKDG VDAQASEKTQ KSRAILGRSV NGVVTDHIQG VRPTAEAERP GSSGSGSTSF
601: WNQIFTSTED KTHAPARDNT ANKSYAVPAP NLEHSLSTIQ LREPPVVLKP LEHQSDQEVL EIAITKLLLK SYYNIVRKNV EDFIPKAIMH FLVNHTKRAL
701: HNYLITKLYR DDLLEDLLKE PDEVTIKRKQ IRENLKVLQQ AYKTLDEIPL DAEAVERGGY SSLDSDAIGL PRAHGLSSSL HGFNDGSSPY STPKQSRSRR
801: SNHSGEQPPF NPNMSGNGF

Best Arabidopsis Sequence Match ( AT4G33650.1 )
(BLAST)

001: MTIEEVSGET PPSTPPSSST PSPSSSTTNA APLGSSVIPI VNKLQDIFAQ LGSQSTIALP QVVVVGSQSS GKSSVLEALV GRDFLPRGND ICTRRPLVLQ
101: LLQTKSRANG GSDDEWGEFR HLPETRFYDF SEIRREIEAE TNRLVGENKG VADTQIRLKI SSPNVLNITL VDLPGITKVP VGDQPSDIEA RIRTMILSYI
201: KQDTCLILAV TPANTDLANS DALQIASIVD PDGHRTIGVI TKLDIMDKGT DARKLLLGNV VPLRLGYVGV VNRCQEDILL NRTVKEALLA EEKFFRSHPV
301: YHGLADRLGV PQLAKKLNQI LVQHIKVLLP DLKSRISNAL VATAKEHQSY GELTESRAGQ GALLLNFLSK YCEAYSSLLE GKSEEMSTSE LSGGARIHYI
401: FQSIFVKSLE EVDPCEDLTD DDIRTAIQNA TGPRSALFVP DVPFEVLVRR QISRLLDPSL QCARFIFEEL IKISHRCMMN ELQRFPVLRK RMDEVIGDFL
501: REGLEPSEAM IGDIIDMEMD YINTSHPNFI GGTKAVEAAM HQVKSSRIPH PVARPKDTVE PDRTSSSTSQ VKSRSFLGRQ ANGIVTDQGV VSADAEKAQP
601: AANASDTRWG IPSIFRGGDT RAVTKDSLLN KPFSEAVEDM SHNLSMIYLK EPPAVLRPTE THSEQEAVEI QITKLLLRSY YDIVRKNIED SVPKAIMHFL
701: VNHTKRELHN VFIKKLYREN LFEEMLQEPD EIAVKRKRTQ ETLHVLQQAY RTLDELPLEA DSVSAGMSKH QELLTSSKYS TSSSYSASPS TTRRSRRAGD
801: QHQNGYGF

Arabidopsis Description

DRP3ANOXY15 [Source:UniProtKB/TrEMBL;Acc:A0A178UUQ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.