CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028497_P001	Maize	cytosol	83.64	87.66
Os03t0260000-01	Rice	cytosol	81.96	79.06
TraesCS4D01G217900.1	Wheat	cytosol	79.97	78.88
EER95148	Sorghum	cytosol	81.35	78.58
TraesCS4B01G217700.1	Wheat	cytosol	75.84	77.74
HORVU4Hr1G061820.3	Barley	plastid	79.66	76.62
TraesCS4A01G086700.1	Wheat	cytosol	77.06	75.9
AT1G60530.1	Thale cress	cytosol	30.58	66.45
PGSC0003DMT400088564	Potato	cytosol	11.31	60.16
CDY36456	Canola	cytosol	16.36	57.53
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	48.32	56.73
CDY53048	Canola	cytosol	43.27	56.6
KRH21193	Soybean	cytosol	42.81	56.45
CDY47217	Canola	cytosol	44.19	56.23
CDY47216	Canola	cytosol	45.57	55.39
Solyc04g072030.1.1	Tomato	cytosol	56.57	54.81
PGSC0003DMT400064542	Potato	cytosol	56.42	54.67
KRH11082	Soybean	cytosol	12.08	54.11
KRH21190	Soybean	cytosol	54.43	53.53
Bra031505.1-P	Field mustard	cytosol	46.48	53.15
PGSC0003DMT400050652	Potato	cytosol	49.69	52.85
KRH42928	Soybean	cytosol	47.4	51.75
PGSC0003DMT400065607	Potato	cytosol	16.21	51.71
PGSC0003DMT400072601	Potato	cytosol	48.62	51.37
CDY53046	Canola	cytosol	52.91	51.34
CDY34120	Canola	cytosol	51.22	51.22
CDY24536	Canola	cytosol	51.22	51.22
KRH59040	Soybean	cytosol	52.75	51.11
Bra031502.1-P	Field mustard	cytosol	51.07	51.07
PGSC0003DMT400064541	Potato	cytosol	47.71	50.98
Bra027151.1-P	Field mustard	cytosol	52.29	50.67
AT1G60500.1	Thale cress	mitochondrion	51.68	50.52
PGSC0003DMT400095128	Potato	cytosol	32.87	48.97
CDY02039	Canola	cytosol, plastid	41.28	48.3
CDY03289	Canola	cytosol	38.53	47.73
CDY34117	Canola	cytosol	38.53	47.73
Bra010250.1-P	Field mustard	cytosol	27.98	46.33
Solyc11g069980.1.1	Tomato	cytosol	55.05	45.06
CDY23281	Canola	cytosol	27.22	44.95
PGSC0003DMT400064491	Potato	cytosol	25.69	42.42
CDY53047	Canola	cytosol	5.35	36.08
PGSC0003DMT400094747	Potato	cytosol	18.2	28.81
KXG37727	Sorghum	cytosol, mitochondrion	23.09	24.67
Bra031511.1-P	Field mustard	cytosol	22.94	24.27
CDY24530	Canola	cytosol, nucleus, plasma membrane	23.39	24.13
EER98546	Sorghum	cytosol	22.94	24.04
EES01270	Sorghum	cytosol	22.02	23.65
EES19921	Sorghum	cytosol	22.02	23.65
KXG38886	Sorghum	cytosol	21.71	22.54
EES04116	Sorghum	cytosol	25.08	20.02
OQU81360	Sorghum	cytosol	21.87	18.92
EES16755	Sorghum	cytosol	17.43	15.06
EES03602	Sorghum	plastid	17.58	13.94
KXG25176	Sorghum	cytosol	12.84	11.17
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	15.14	10.84
EES05560	Sorghum	nucleus	15.14	10.75

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1B6QP98	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF
InterPro:Dynamin_central	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381
EnsemblPlants:KXG39737	ProteinID:KXG39737	ProteinID:KXG39737.1	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031
PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF135	SMART:SM00053
EnsemblPlantsGene:SORBI_3001G430200	SUPFAM:SSF52540	UniParc:UPI00081AC764	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:70941496..70943520

Molecular Weight (calculated)

72503.9 Da

IEP (calculated)

6.287

GRAVY (calculated)

-0.233

Length

654 amino acids

Sequence
(BLAST)

001: MSKKRRTGDK LENDDGDAKG TAAVIASGVT ASAIAASYND QIRPVLDAVD RLRHLKVTQE GIQLPTIVVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQGDP SADSPKLQLE YSNGRVVTTT EAKVADAINA ATAEIAGSGK GISDAPITLV VRKRGVPDLT LVDLPGITRV PVQGQPEDIY DQIAKIIKEY
201: ITPKESIILN VLSATVDFPT CESIRMSQQV DRTGERTLAV VTKVDKAPEG LLEKVTMDDV HIGLGYVCVR NRVGEETYDQ KRIEEARLFK NHTLLSKIDK
301: SMVGIPVLAQ RLMQIQATII AKCLPDIVKQ INDRLMRSST ELDQMPPDLI NTGDAVRVFF HIVKKVCTSL EKILVRGEFG GYPDDCYFHG TARIAEMLNR
401: YAKKLPTECP RCSDENFLTE EMRVLEETVG INLPNFLPRS AFHVMLKKKV EMVSQVPQDL VNEVWEYVED LVMKILLQHS ENFPQVQSSC RRAIQSLMEK
501: TRARSAQHVK EMIEMELVAD YTANPDYMKT WEAIMEDQKK FMDSVENKSN PSKITLKCFG EVDGTANRVQ VLRLVDGLAL HVLRGVKRLV ENDLEDELGN
601: ELLGNNMAGV ERMLSPPPST GTKRDRLKKS IVLLQQSKEV VANIMDRISA ADEA

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.