Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G60530.1 | Thale cress | cytosol | 38.12 | 84.72 |
| CDY47216 | Canola | cytosol | 67.86 | 84.39 |
| CDY47217 | Canola | cytosol | 64.28 | 83.66 |
| CDY53048 | Canola | cytosol | 61.58 | 82.4 |
| Bra027151.1-P | Field mustard | cytosol | 82.66 | 81.93 |
| CDY53046 | Canola | cytosol | 82.21 | 81.6 |
| PGSC0003DMT400088564 | Potato | cytosol | 11.66 | 63.41 |
| Solyc04g072030.1.1 | Tomato | cytosol | 56.95 | 56.44 |
| PGSC0003DMT400064542 | Potato | cytosol | 56.35 | 55.85 |
| PGSC0003DMT400050652 | Potato | cytosol | 50.37 | 54.8 |
| Zm00001d028495_P001 | Maize | cytosol | 55.01 | 54.6 |
| KRH11082 | Soybean | cytosol | 11.81 | 54.11 |
| EER95148 | Sorghum | cytosol | 54.26 | 53.62 |
| Os03t0260000-01 | Rice | cytosol | 54.26 | 53.54 |
| TraesCS4B01G217700.1 | Wheat | cytosol | 50.97 | 53.45 |
| GSMUA_Achr8P19650_001 | Banana | cytosol, mitochondrion | 44.39 | 53.32 |
| TraesCS4D01G217900.1 | Wheat | cytosol | 52.47 | 52.94 |
| PGSC0003DMT400095128 | Potato | cytosol | 34.53 | 52.62 |
| PGSC0003DMT400064541 | Potato | cytosol | 48.13 | 52.61 |
| TraesCS4A01G086700.1 | Wheat | cytosol | 52.02 | 52.41 |
| PGSC0003DMT400072601 | Potato | cytosol | 48.28 | 52.18 |
| KXG39737 | Sorghum | cytosol | 50.52 | 51.68 |
| HORVU4Hr1G061820.3 | Barley | plastid | 52.32 | 51.47 |
| TraesCS4A01G213700.1 | Wheat | cytosol | 45.14 | 51.01 |
| TraesCS4D01G098800.1 | Wheat | cytosol | 50.52 | 49.42 |
| Os04t0129900-01 | Rice | cytosol | 50.07 | 48.98 |
| Zm00001d028497_P001 | Maize | cytosol | 45.44 | 48.72 |
| Solyc11g069980.1.1 | Tomato | cytosol | 54.71 | 45.81 |
| PGSC0003DMT400064491 | Potato | cytosol | 26.76 | 45.2 |
| AT3G61760.1 | Thale cress | cytosol | 23.62 | 25.9 |
| AT5G42080.1 | Thale cress | cytosol | 23.47 | 25.74 |
| AT1G14830.1 | Thale cress | cytosol | 23.62 | 25.73 |
| AT3G60190.1 | Thale cress | cytosol | 23.92 | 25.64 |
| AT2G44590.3 | Thale cress | cytosol | 22.57 | 24.67 |
| AT4G33650.2 | Thale cress | cytosol | 25.41 | 21.01 |
| AT2G14120.3 | Thale cress | cytosol, plastid | 24.81 | 20.52 |
| AT3G19720.1 | Thale cress | cytosol | 16.29 | 14.03 |
| AT1G53140.1 | Thale cress | plastid | 16.29 | 13.34 |
| AT1G10290.1 | Thale cress | cytosol | 15.99 | 11.71 |
| AT1G59610.1 | Thale cress | cytosol | 15.7 | 11.41 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:842345 | ProteinID:AAB71966.1 | ProteinID:AEE33694.1 | ArrayExpress:AT1G60500 |
| EnsemblPlantsGene:AT1G60500 | RefSeq:AT1G60500 | TAIR:AT1G60500 | RefSeq:AT1G60500-TAIR-G | EnsemblPlants:AT1G60500.1 | TAIR:AT1G60500.1 |
| Unigene:At.36640 | Symbol:DRP4C | InterPro:Dynamin_GTPase | InterPro:Dynamin_SF | InterPro:Dynamin_central | InterPro:GED |
| InterPro:GED_dom | GO:GO:0000166 | GO:GO:0000266 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016787 | InterPro:G_DYNAMIN_dom | InterPro:IPR020850 | InterPro:IPR030381 | RefSeq:NP_176252.1 |
| InterPro:P-loop_NTPase | PFAM:PF00350 | PFAM:PF01031 | PFAM:PF02212 | PO:PO:0020094 | PRINTS:PR00195 |
| PFscan:PS51388 | PFscan:PS51718 | PANTHER:PTHR11566 | PANTHER:PTHR11566:SF135 | UniProt:Q9ZP55 | SMART:SM00053 |
| SMART:SM00302 | SUPFAM:SSF52540 | UniParc:UPI00000A2E4B | : | : | : |
Description
DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
Coordinates
chr1:+:22291582..22293964
Molecular Weight (calculated)
74601.9 Da
IEP (calculated)
6.449
GRAVY (calculated)
-0.116
Length
669 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.