Factsheet for HORVU4Hr1G061820.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G217900.1	Wheat	cytosol	94.12	96.53
TraesCS4B01G217700.1	Wheat	cytosol	77.79	82.92
Os03t0260000-01	Rice	cytosol	82.5	82.74
TraesCS4A01G086700.1	Wheat	cytosol	78.68	80.57
KXG39737	Sorghum	cytosol	76.62	79.66
Zm00001d028497_P001	Maize	cytosol	70.59	76.92
AT1G60530.1	Thale cress	cytosol	30.44	68.77
PGSC0003DMT400088564	Potato	cytosol	10.88	60.16
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	49.26	60.14
CDY36456	Canola	cytosol	16.32	59.68
KRH21193	Soybean	cytosol	42.79	58.67
CDY53048	Canola	cytosol	42.21	57.4
CDY47217	Canola	cytosol	43.38	57.39
Solyc04g072030.1.1	Tomato	cytosol	56.47	56.89
PGSC0003DMT400064542	Potato	cytosol	56.32	56.74
CDY47216	Canola	cytosol	44.56	56.32
KRH21190	Soybean	cytosol	55.0	56.24
KRH11082	Soybean	cytosol	12.06	56.16
KRH42928	Soybean	cytosol	49.41	56.09
PGSC0003DMT400072601	Potato	cytosol	50.59	55.57
PGSC0003DMT400050652	Potato	cytosol	50.0	55.28
KRH59040	Soybean	cytosol	53.82	54.22
PGSC0003DMT400095128	Potato	cytosol	34.56	53.53
PGSC0003DMT400064541	Potato	cytosol	48.09	53.43
CDY34120	Canola	cytosol	51.18	53.21
CDY24536	Canola	cytosol	51.18	53.21
CDY53046	Canola	cytosol	52.65	53.12
Bra031502.1-P	Field mustard	cytosol	51.03	53.06
Bra031505.1-P	Field mustard	cytosol	44.56	52.97
Bra027151.1-P	Field mustard	cytosol	52.35	52.74
AT1G60500.1	Thale cress	mitochondrion	51.47	52.32
PGSC0003DMT400065607	Potato	cytosol	15.59	51.71
CDY02039	Canola	cytosol, plastid	42.21	51.34
CDY03289	Canola	cytosol	38.97	50.19
CDY34117	Canola	cytosol	38.97	50.19
Bra010250.1-P	Field mustard	cytosol	27.79	47.85
PGSC0003DMT400064491	Potato	cytosol	27.5	47.22
CDY23281	Canola	cytosol	26.91	46.21
Solyc11g069980.1.1	Tomato	cytosol	54.26	46.18
CDY53047	Canola	cytosol	5.44	38.14
PGSC0003DMT400094747	Potato	cytosol	19.71	32.45
Bra031511.1-P	Field mustard	cytosol	24.85	27.35
CDY24530	Canola	cytosol, nucleus, plasma membrane	25.0	26.81
HORVU4Hr1G007880.11	Barley	cytosol	22.65	24.25
HORVU1Hr1G084970.2	Barley	plasma membrane	23.68	23.82
HORVU1Hr1G054560.1	Barley	mitochondrion	22.35	22.09
HORVU6Hr1G058700.1	Barley	cytosol	3.38	21.5
HORVU3Hr1G094260.4	Barley	cytosol	25.29	21.1
HORVU2Hr1G068810.3	Barley	cytosol	22.79	19.47
HORVU3Hr1G071340.9	Barley	cytosol, plastid	17.65	13.99
HORVU7Hr1G040670.2	Barley	cytosol, nucleus, plasma membrane	15.44	11.64
HORVU4Hr1G074040.2	Barley	nucleus	4.26	11.33
HORVU6Hr1G077000.1	Barley	cytosol, mitochondrion, nucleus	15.88	11.12
HORVU5Hr1G092990.14	Barley	cytosol	4.12	10.57
HORVU4Hr1G073960.12	Barley	cytosol	5.88	10.03
HORVU2Hr1G095510.1	Barley	cytosol	0.88	6.82
HORVU2Hr1G095500.1	Barley	cytosol	0.88	5.08
HORVU1Hr1G001520.1	Barley	cytosol	0.59	4.44

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287PAI4	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF
InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	EnsemblPlantsGene:HORVU4Hr1G061820
EnsemblPlants:HORVU4Hr1G061820.3	InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031
PFAM:PF02212	PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF135
SMART:SM00053	SUPFAM:SSF52540	UniParc:UPI000B478A29	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:-:519390254..519392394

Molecular Weight (calculated)

75518.6 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.123

Length

680 amino acids

Sequence
(BLAST)

001: HSSSQARSHP ALASGMSNLQ MVLSDPTATA AASAVTGSAI AASYNDQIRP LLDAVDRLRH LKVTQEGIQL PTIVVVGDQS SGKSSVLESL AGISLPRGQG
101: ICTRVPLVMR LQDDPSADAP VLQLEYSNGR VVTTTEANVA DAINAATAEI AGSGKGISDA PITLIVRKRG VPDLTLVDLP GITRVPVHGQ PDDIYDQIAR
201: IIREYISPKE SIILNVLSAT VDFPTCESIR MSQQVDRTGE RTLAVVTKVD KAPEGLLEKV TMDDVNIGLG YVCVRNRIGE ETYDQARVEE ERLFKHHSLL
301: SKIDKDMVGI PVLAQRLVQI QATIIAKCLP DIVRQINDRL SRSSTELDQM PPDLSNVADA VRAFFHIVKL VCASLEKILV RSEFDEYPDD IHFHATARIA
401: EMFDKYAKKL PAQIPRGSDQ LFLMEEMLVL EETKGINLPN FLPRSAFLVL LKKKVDTVMQ VPHDLVNEVW NYVEDIVVKV LMQHSENFPQ VQAACRRAVQ
501: GMFEKARARS AQHVKELIEM EKVADYTANP DYMKTWSEIM QCHDRFMKAV EDKSKSARVT LEVFGEVDVS HMRAHADLAR QAFDLRARLT AYWKSIMLRL
601: IDGLALHILL GVKRLVENDL EEELANELLR NKMAGMERML TPSPSSGTKR ERLKKSIVLL RQSKEVVGSI MDRICASGEI

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.