Factsheet for HORVU4Hr1G007880.11

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G002410.2
HORVU2Hr1G002480.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14830.1	HORVU2Hr1G002410.2	AT5G57460.1	24529374
AT1G14830.1	HORVU2Hr1G002480.5	AT5G57460.1	24529374

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G266600.1	Wheat	cytosol	93.23	97.05
TraesCS4B01G047700.1	Wheat	cytosol	93.23	97.05
TraesCS4D01G047600.1	Wheat	golgi, nucleus, unclear	93.23	97.05
Os03t0713100-01	Rice	plasma membrane	89.92	93.45
Zm00001d013426_P002	Maize	plasma membrane	87.4	90.83
KXG37727	Sorghum	cytosol, mitochondrion	87.4	90.69
Zm00001d033751_P003	Maize	plasma membrane	87.09	90.51
GSMUA_Achr2P21630_001	Banana	cytosol	79.53	82.92
GSMUA_Achr7P11190_001	Banana	cytosol	79.53	82.52
KRH60421	Soybean	endoplasmic reticulum	77.32	79.58
KRH41722	Soybean	endoplasmic reticulum, nucleus	77.17	79.42
AT1G14830.1	Thale cress	cytosol	76.38	78.99
CDY33737	Canola	cytosol	76.22	78.83
CDX81675	Canola	cytosol	76.22	78.83
Bra026801.1-P	Field mustard	cytosol	76.22	78.83
CDX84001	Canola	cytosol	75.75	78.34
VIT_01s0011g05800.t01	Wine grape	cytosol	75.59	78.3
Bra016679.1-P	Field mustard	cytosol	75.59	78.18
CDY52026	Canola	cytosol	75.59	78.18
KRH49665	Soybean	endoplasmic reticulum	75.28	77.35
KRH70357	Soybean	endoplasmic reticulum, nucleus	74.96	77.02
Solyc01g005310.2.1	Tomato	plastid	75.12	76.69
PGSC0003DMT400051417	Potato	cytosol	63.46	72.88
HORVU1Hr1G054560.1	Barley	mitochondrion	73.07	67.44
HORVU1Hr1G084970.2	Barley	plasma membrane	63.94	60.06
HORVU3Hr1G094260.4	Barley	cytosol	32.76	25.52
HORVU2Hr1G068810.3	Barley	cytosol	31.97	25.5
HORVU4Hr1G061820.3	Barley	plastid	24.25	22.65
HORVU6Hr1G058700.1	Barley	cytosol	3.78	22.43
HORVU7Hr1G040670.2	Barley	cytosol, nucleus, plasma membrane	27.72	19.51
HORVU6Hr1G077000.1	Barley	cytosol, mitochondrion, nucleus	28.03	18.33
HORVU3Hr1G071340.9	Barley	cytosol, plastid	18.58	13.75
HORVU5Hr1G092990.14	Barley	cytosol	4.57	10.94
HORVU4Hr1G074040.2	Barley	nucleus	4.41	10.94
HORVU4Hr1G073960.12	Barley	cytosol	5.51	8.77
HORVU2Hr1G095510.1	Barley	cytosol	1.1	7.95
HORVU1Hr1G001520.1	Barley	cytosol	0.94	6.67
HORVU2Hr1G095500.1	Barley	cytosol	1.1	5.93

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	Gene3D:3.40.50.300	UniProt:A0A287N3G0	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS
InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0000266
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0005938	GO:GO:0007005
GO:GO:0007275	GO:GO:0008150	GO:GO:0009504	GO:GO:0009506	GO:GO:0009987	GO:GO:0010152
GO:GO:0016020	GO:GO:0016043	GO:GO:0016787	InterPro:G_DYNAMIN_dom	EnsemblPlantsGene:HORVU4Hr1G007880	EnsemblPlants:HORVU4Hr1G007880.11
InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212
PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF80
SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	UniParc:UPI000B485B71	SEG:seg	:

Description

No Description!

Coordinates

chrchr4H:-:21422466..21428948

Molecular Weight (calculated)

70809.8 Da

IEP (calculated)

9.659

GRAVY (calculated)

-0.485

Length

635 amino acids

Sequence
(BLAST)

001: ALPPPPSLRQ TDPNPHRHRH RHRHRRRRPP HAGKRPEGAR QACTVLGDHG GGAGGSLWEA LPSVAVVGGQ SSGKSSVLES IVGRDFLPRG SGIVTRRPLV
101: LQLHKTEGGQ EYAEFLHAPR KRFSDFAAVR KEIADETDRM TGKTKAISNV PIHLSIYSPH VVNLTLIDLP GLTKVAVEGQ PESIVQDIEN MVRSYVDKPN
201: SIILAISPAN QDIATSDAIK LAKDVDPTGE RTFGVVTKLD LMDKGTNAID VLEGRSYRLQ HPWVGIVNRS QADINKNVDM LAARRKEQEY FQSSSDYGHL
301: AHKMGAEYLA KLLSQHLEAV IKAKIPSIIS MINKTVDEIE AELDRLGRPI GGDAGAQLYT ILDMCRAFDR VFKEHLDGGR PGGDRIYGVF DHQLPAALKK
401: LPFDKHLSLQ NVRKVISEAD GYQPHLIAPE QGYRRLIDSS LSYFRGPAEA SVDAVHLVLK ELVRRSIAAT EELKRFPTLQ SDIAAAANES LERFREDGRK
501: TVIRLVDMEA SYLTVEFFRK LPTEPDKGAN NNTPANDRYQ DNHLRRIGSN VSSYINMVCD TLRNTIPKAV VHCQVKEAKR NLLNRFYAHV GSKEKKQLSA
601: MLDEDPALME KRDSLVKKLE LYKSARNEID SVAWK

Best Arabidopsis Sequence Match ( AT1G14830.1 )
(BLAST)

001: MATMKSLIGL INKIQRACTV LGDHGGEGMS LWEALPTVAV VGGQSSGKSS VLESVVGRDF LPRGSGIVTR RPLVLQLHKT EDGTTEYAEF LHAPKKRFAD
101: FAAVRKEIED ETDRITGKSK QISNIPIQLS IYSPNVVNLT LIDLPGLTKV AVDGQPESIV QDIENMVRSY VEKPNCIILA ISPANQDIAT SDAIKLAREV
201: DPTGERTFGV ATKLDIMDKG TDCLDVLEGR SYRLQHPWVG IVNRSQADIN KRVDMIAARR KEQEYFETSP EYGHLASRMG SEYLAKLLSQ HLETVIRQKI
301: PSIVALINKS IDEINAELDR IGRPIAVDSG AQLYTILELC RAFDRVFKEH LDGGRPGGDR IYGVFDHQLP AALKKLPFDR HLSTKNVQKV VSEADGYQPH
401: LIAPEQGYRR LIDGSISYFK GPAEATVDAV HFVLKELVRK SISETEELKR FPTLASDIAA AANEALERFR DESRKTVLRL VDMESSYLTV EFFRKLHLEP
501: EKEKPNPRNA PAPNADPYSD NHFRKIGSNV SAYINMVCDT LRNSLPKAVV YCQVREAKRS LLNFFYAQVG RKEKEKLGAM LDEDPQLMER RGTLAKRLEL
601: YKQARDDIDA VAWK

Arabidopsis Description

DRP1CDRP1C [Source:UniProtKB/TrEMBL;Acc:A0A178W4V6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.