Factsheet for Os04t0129900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0260000-01	Rice	cytosol	69.74	70.35
AT1G60530.1	Thale cress	cytosol	28.95	65.78
CDY36456	Canola	cytosol	16.23	59.68
PGSC0003DMT400088564	Potato	cytosol	10.53	58.54
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	47.66	58.53
KRH21193	Soybean	cytosol	41.81	57.66
KRH21190	Soybean	cytosol	54.53	56.09
CDY47217	Canola	cytosol	41.67	55.45
CDY53048	Canola	cytosol	39.77	54.4
KRH42928	Soybean	cytosol	47.51	54.26
Solyc04g072030.1.1	Tomato	cytosol	53.51	54.22
PGSC0003DMT400064542	Potato	cytosol	53.36	54.07
CDY47216	Canola	cytosol	41.96	53.35
KRH59040	Soybean	cytosol	52.05	52.74
KRH11082	Soybean	cytosol	11.26	52.74
PGSC0003DMT400050652	Potato	cytosol	46.78	52.03
PGSC0003DMT400072601	Potato	cytosol	47.08	52.02
CDY34120	Canola	cytosol	48.83	51.07
Bra031505.1-P	Field mustard	cytosol	42.69	51.05
CDY24536	Canola	cytosol	48.68	50.92
Bra031502.1-P	Field mustard	cytosol	48.68	50.92
Bra027151.1-P	Field mustard	cytosol	50.0	50.67
PGSC0003DMT400064541	Potato	cytosol	45.32	50.65
PGSC0003DMT400095128	Potato	cytosol	32.31	50.34
CDY53046	Canola	cytosol	49.56	50.3
AT1G60500.1	Thale cress	mitochondrion	48.98	50.07
PGSC0003DMT400065607	Potato	cytosol	14.91	49.76
CDY03289	Canola	cytosol	37.72	48.86
CDY34117	Canola	cytosol	37.72	48.86
CDY02039	Canola	cytosol, plastid	39.91	48.84
Bra010250.1-P	Field mustard	cytosol	27.92	48.35
CDY23281	Canola	cytosol	27.34	47.22
PGSC0003DMT400064491	Potato	cytosol	26.02	44.95
Solyc11g069980.1.1	Tomato	cytosol	51.75	44.31
CDY53047	Canola	cytosol	5.85	41.24
Os01t0681100-01	Rice	cytosol, plasma membrane	10.23	38.04
PGSC0003DMT400094747	Potato	cytosol	18.71	30.99
Os03t0713100-01	Rice	plasma membrane	23.98	26.84
Bra031511.1-P	Field mustard	cytosol	23.54	26.05
CDY24530	Canola	cytosol, nucleus, plasma membrane	23.83	25.71
Os05t0556100-01	Rice	plasma membrane	22.81	25.62
Os10t0567800-01	Rice	plasma membrane	22.37	24.76
Os09t0572900-01	Rice	cytosol, plasma membrane	22.08	24.12
Os01t0920400-01	Rice	nucleus, plastid	24.85	20.78
Os04t0381000-01	Rice	cytosol	22.95	19.34
Os12t0178700-01	Rice	cytosol	13.6	16.64
Os01t0748000-00	Rice	plastid	16.67	13.87
Os08t0425100-01	Rice	plasma membrane	14.04	12.53
Os06t0247800-01	Rice	plasma membrane	16.37	12.29
Os02t0738900-01	Rice	plasma membrane	16.37	12.13

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0P0W699	ProteinID:BAS87706.1	InterPro:Dynamin_GTPase
InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0000266
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381
EnsemblPlantsGene:Os04g0129900	EnsemblPlants:Os04t0129900-01	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212
PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF135	SMART:SM00053
SUPFAM:SSF52540	UniParc:UPI000393BE03	SEG:seg	:	:	:

Description

Similar to OSIGBa0103I21.1 protein. (Os04t0129900-01)

Coordinates

chr4:-:1874562..1876811

Molecular Weight (calculated)

75749.4 Da

IEP (calculated)

6.463

GRAVY (calculated)

-0.259

Length

684 amino acids

Sequence
(BLAST)

001: AAGAEQEEME EEDVKGGIAR SAMAASYNDQ IRPLLDAVDR LRQLNVSQEG IQLPTIVVVG DQSSGKSSVL ESLAGISLPR GQGICTRVPL VMRLQDAGDD
101: DEPALRLEYS GGRVVATSEA EVADAINAAT AEIAGCGKGI SNAPITLVVR KKGVPDLTLV DLPGITRVPV KGQPEDIYDQ IAGIIKAYIA PRESIILNVL
201: SATVDFPTCE SIRMSQQVDR TGNRTLAVVT KSDKAPEGLL EKVTVDDVRI GLGYVCVRNR IGDETYKEAR EAEARLFAEH PLLSRIDKSM VGVPTLARRL
301: TQIQARIIAR SLPDIVKQIN DKLSRSSDEL GQMPPELCTV ADAVREFFHI VNQMRASLEK VLVRGEFDEY PNDRHHHGTA RLAKMLEGFA RRLPAAAATD
401: GEPFLVEEMR VLKETKGINL PNFMPRSALH VLLNRKVKSI AQVPHDLVRQ VWDYVEDLVL KELQRHSRSY PQVQPSCRPA VQSLMDKARE RSARYVNELI
501: DMEMVANYTA NPEYIKTWTS MMDGQSRLRE ALEDRSKPVA KLRSFSKPTA VALPGFGETD VSHLHQLPPE QVELAMQAFD LKARLAAYWN SVVLRVIDGL
601: ALHVLYSIKR LAEKDLEDEL AAQVMGNNMD GVERMLVPTP AAAAKRDCLK KSIKLLRESR EVVANIMDRL TRQAPTMSDN YYST

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.