Factsheet for Zm00001d028495_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95148	Sorghum	cytosol	92.73	92.32
Zm00001d028497_P001	Maize	cytosol	70.03	75.64
AT1G60530.1	Thale cress	cytosol	29.82	66.78
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	50.3	60.86
CDY36456	Canola	cytosol	16.77	60.75
PGSC0003DMT400088564	Potato	cytosol	10.83	59.35
CDY53048	Canola	cytosol	43.03	58.0
CDY47217	Canola	cytosol	44.07	57.78
CDY47216	Canola	cytosol	45.99	57.62
KRH21193	Soybean	cytosol	41.84	56.85
PGSC0003DMT400064542	Potato	cytosol	56.68	56.59
Solyc04g072030.1.1	Tomato	cytosol	56.38	56.3
KRH21190	Soybean	cytosol	55.34	56.09
KRH42928	Soybean	cytosol	48.96	55.09
AT1G60500.1	Thale cress	mitochondrion	54.6	55.01
PGSC0003DMT400072601	Potato	cytosol	50.3	54.77
CDY53046	Canola	cytosol	54.45	54.45
Bra031502.1-P	Field mustard	cytosol	52.67	54.28
CDY34120	Canola	cytosol	52.67	54.28
CDY24536	Canola	cytosol	52.52	54.13
PGSC0003DMT400050652	Potato	cytosol	49.26	53.98
Bra027151.1-P	Field mustard	cytosol	53.86	53.78
Bra031505.1-P	Field mustard	cytosol	45.55	53.67
PGSC0003DMT400064541	Potato	cytosol	48.66	53.59
KRH59040	Soybean	cytosol	53.26	53.19
KRH11082	Soybean	cytosol	11.42	52.74
CDY02039	Canola	cytosol, plastid	43.03	51.88
PGSC0003DMT400095128	Potato	cytosol	33.68	51.71
CDY34117	Canola	cytosol	40.06	51.14
CDY03289	Canola	cytosol	40.06	51.14
PGSC0003DMT400065607	Potato	cytosol	15.43	50.73
Bra010250.1-P	Field mustard	cytosol	29.08	49.62
CDY23281	Canola	cytosol	28.34	48.23
PGSC0003DMT400064491	Potato	cytosol	27.89	47.47
Solyc11g069980.1.1	Tomato	cytosol	54.75	46.18
CDY53047	Canola	cytosol	5.93	41.24
PGSC0003DMT400094747	Potato	cytosol	20.18	32.93
Bra031511.1-P	Field mustard	cytosol	25.82	28.16
CDY24530	Canola	cytosol, nucleus, plasma membrane	26.26	27.92
Zm00001d033751_P003	Maize	plasma membrane	23.44	25.86
Zm00001d013426_P002	Maize	plasma membrane	23.29	25.7
Zm00001d005306_P002	Maize	cytosol, extracellular, mitochondrion	22.85	24.52
Zm00001d009504_P002	Maize	cytosol	23.0	23.63
Zm00001d038955_P001	Maize	cytosol, mitochondrion, plasma membrane	23.15	23.28
Zm00001d042338_P002	Maize	extracellular, mitochondrion	25.22	20.81
Zm00001d012027_P002	Maize	cytosol	24.93	19.76
Zm00001d023583_P005	Maize	plastid	17.8	15.83
Zm00001d030005_P002	Maize	cytosol, mitochondrion	9.2	15.42
Zm00001d043451_P001	Maize	plastid	16.62	13.61
Zm00001d004012_P001	Maize	cytosol	21.36	13.16
Zm00001d012752_P006	Maize	plastid	15.88	12.75
Zm00001d017979_P002	Maize	extracellular, mitochondrion	15.73	11.51
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	15.58	11.5
Zm00001d037279_P005	Maize	plasma membrane	15.13	11.17
Zm00001d032256_P001	Maize	cytosol	13.65	9.89
Zm00001d051815_P002	Maize	cytosol	4.01	4.92

Protein Annotations

Gene3D:1.20.120.1240	EntrezGene:103634000	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6JWT4	InterPro:Dynamin_GTPase
InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850
InterPro:IPR030381	ProteinID:ONL96199.1	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PRINTS:PR00195
PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF135	SMART:SM00053	SUPFAM:SSF52540
UniParc:UPI000221A196	EnsemblPlantsGene:Zm00001d028495	EnsemblPlants:Zm00001d028495_P001	EnsemblPlants:Zm00001d028495_T001	SEG:seg	:

Description

Putative dynamin-related protein 4A

Coordinates

chr1:+:37166917..37168941

Molecular Weight (calculated)

74685.7 Da

IEP (calculated)

6.323

GRAVY (calculated)

-0.164

Length

674 amino acids

Sequence
(BLAST)

001: MPKKGHMGTP KQAYATDGGK GDVAAGSTVT ASAIASSYDD QIRPLLDAVD RLRHLKVTQE GIQLPTIVVV GDQSSGKSSV LESLAGISLP RGQGICTRVP
101: LVMRLQDDPS ADSPKLQLEY SNGRVVTTTE ADVADAINAA TAEIAGSGKG ISDAPITLVV RKRGVPDLTL VDLPGITRVP VHGQPEDIYD QVAKIIKEYI
201: APKESIILNV LSATVDFPTC ESIRMSQQVD RSGERTLAVV TKVDKNPEGL LEKVTMDDVN IGLGYVCVRN RIGDETYDQA RVEEERLFKY HPLLSKIDKD
301: MVGIPVLANR LMQIQSTIIA KCLPDIVKQI NDRLSRSSAE LDQMPQDLNN VADAVRVFFH IVKQVCNSLE KLLVRGDFAE YPDAREFHGT ARIADMLSGY
401: AKELPAQCPI NRNEPFLMEE VRILEETKGI NLPNFLPRTA FLVLLKKKVQ IIDVIPQELA NKVWDYVEDL VMKVLLKHSE NFPQMQSPCR RAVQTLMDKA
501: RLRSAHHVKE LIAMELVADY TANPDYMKTW TEIMEGYEMF MEAVEDKSKP TRITLKGFGE VDVSHLRVYA DFAGKAFDLR ARLTAYWKSI VLRQVDGLAL
601: HVLLSVKLLV EKDLEEELGN ELLSNKLAGV EKMLAPSPGT GTKRERLKKS IVLLRQSKEV VANIMDRISA AGDI

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.