CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06461	Soybean	cytosol	79.64	93.45
Solyc05g050600.2.1	Tomato	nucleus, plastid	84.73	84.73
PGSC0003DMT400000646	Potato	cytosol	84.4	84.26
Solyc01g095970.2.1	Tomato	plastid	84.24	84.1
GSMUA_Achr1P04880_001	Banana	cytosol	84.07	83.93
AT3G61760.1	Thale cress	cytosol	83.58	83.44
KRH60047	Soybean	endoplasmic reticulum	83.42	83.28
TraesCS1D01G393000.2	Wheat	cytosol	83.25	83.25
Os05t0556100-01	Rice	plasma membrane	83.25	83.25
TraesCS1A01G385400.2	Wheat	cytosol, golgi, nucleus, unclear	83.25	83.25
EES19921	Sorghum	cytosol	83.25	83.25
TraesCS1B01G411700.3	Wheat	cytosol	83.09	83.09
KRH41321	Soybean	endoplasmic reticulum, nucleus	82.92	82.79
VIT_15s0046g00470.t01	Wine grape	cytosol	83.42	82.74
CDY25074	Canola	cytosol	82.76	82.62
CDX67862	Canola	cytosol	82.76	82.62
Bra003469.1-P	Field mustard	cytosol	77.5	82.09
KRH77654	Soybean	endoplasmic reticulum	82.1	81.97
KRH27831	Soybean	cytosol, endoplasmic reticulum, nucleus	81.77	81.64
EES01270	Sorghum	cytosol	79.97	79.97
Os01t0681100-01	Rice	cytosol, plasma membrane	23.97	79.35
Zm00001d009504_P002	Maize	cytosol	82.59	76.68
Zm00001d038955_P001	Maize	cytosol, mitochondrion, plasma membrane	83.09	75.52
HORVU1Hr1G084970.2	Barley	plasma membrane	83.25	75.0
KRH48908	Soybean	cytosol, nucleus	69.62	68.61
KRH66384	Soybean	cytosol, endoplasmic reticulum	68.97	67.96
KRH46533	Soybean	cytosol, endoplasmic reticulum, nucleus	67.65	66.88
KRH04285	Soybean	cytosol	66.17	65.85
KRH41722	Soybean	endoplasmic reticulum, nucleus	66.67	65.8
KRH60421	Soybean	endoplasmic reticulum	66.34	65.48
KRH49665	Soybean	endoplasmic reticulum	66.17	65.21
KRH70357	Soybean	endoplasmic reticulum, nucleus	65.68	64.72
TraesCS6B01G443600.1	Wheat	cytosol	41.05	47.8
TraesCS6D01G385300.1	Wheat	cytosol	36.95	45.45
KRH10618	Soybean	plastid	36.45	26.97
KRH21736	Soybean	nucleus	36.45	26.88
KRH49844	Soybean	plastid	35.14	26.35
KRH42074	Soybean	endoplasmic reticulum, nucleus	35.14	26.29
KRH62781	Soybean	nucleus	34.65	25.83
KRH21193	Soybean	cytosol	19.87	24.4
KRH42928	Soybean	cytosol	23.48	23.87
KRH59040	Soybean	cytosol	25.29	22.81
KRH21190	Soybean	cytosol	23.81	21.8
KRH27552	Soybean	cytosol	29.23	19.31
KRH11082	Soybean	cytosol	4.6	19.18
KRH36411	Soybean	endoplasmic reticulum, nucleus	28.9	19.09
KRH51295	Soybean	endoplasmic reticulum	27.91	18.6
KRH01870	Soybean	endoplasmic reticulum	27.91	18.6
KRH55251	Soybean	plastid	22.82	17.48
KRH26094	Soybean	plastid	22.66	17.16
KRH42202	Soybean	nucleus	18.72	15.18
KRH58326	Soybean	plasma membrane	7.88	9.62

Protein Annotations

Gene3D:1.20.120.1240	EntrezGene:100793097	MapMan:22.1.7.1	Gene3D:3.40.50.300	EMBL:ACUP02004183	InterPro:Dynamin_GTPase
InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	EnsemblPlantsGene:GLYMA_07G055600
GO:GO:0000166	GO:GO:0000266	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	InterPro:G_DYNAMIN_dom
UniProt:I1KHV2	InterPro:IPR020850	InterPro:IPR030381	EnsemblPlants:KRH47905	ProteinID:KRH47905	ProteinID:KRH47905.1
InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410
PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF58	SMART:SM00053	SMART:SM00302
SUPFAM:SSF52540	UniParc:UPI00023387F7	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:4902632..4909473

Molecular Weight (calculated)

68372.7 Da

IEP (calculated)

7.669

GRAVY (calculated)

-0.298

Length

609 amino acids

Sequence
(BLAST)

001: MENLIQLVNK IQQACTALGD HGEEGAMPTL WDALPSIAVV GGQSSGKSSV LESVVGKDFL PRGSGIVTRR PLVLQLHKID EGREYAEFMH LPRKKFTDFA
101: AVRQEIADET DRETGRNKGI SSVPIHLSIY SPHVVNLTLV DLPGLTKVAV DGQPDSIVQD IENMVRAFIE KPNCIILAIS PANQDLATSD AIKISREVDP
201: KGERTFGVLT KIDLMDKGTD AAEILEGKSY KLNFPWIGVV NRSQADINKQ VDMIAARKRE MEYFANTPEY RHLASRMGSV HLGKVLSKHL ESVIKSRIPG
301: LQSLINKTII ELETELNRIG KPIAADTGGK LYMIMEICRT FDQIFKDHLD GIRPGGEKIY QVFDNQFPAS IKRLQFDKHL SIDKVRKLIT EADGYQPHLI
401: APEQGYRRLI ESCLVSIRGP AEAAVDAVHG ILKDLIQKSM SETMELKQYP TLRVELGSAA VDSLERMREE SKKSTLLLVD MEYGYLTVDF FRKLPQDAEK
501: GGNPTHSLFD RYNDSYLRRI ATTVLSYVNM VCGTLRHTIP KSVVYCQVRE AKRSLLDHFF TELGKKEGKQ LASLLNEDPA IMQRRTSLAK RLELYRNAQS
601: EIEAVAWER

Best Arabidopsis Sequence Match ( AT3G61760.1 )
(BLAST)

001: MESLIALVNK IQRACTALGD HGEGSSLPTL WDSLPAIAVV GGQSSGKSSV LESVVGKDFL PRGAGIVTRR PLVLQLHRID EGKEYAEFMH LPKKKFTDFA
101: AVRQEISDET DRETGRSSKV ISTVPIHLSI FSPNVVNLTL VDLPGLTKVA VDGQPESIVQ DIENMVRSFI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PKGDRTFGVL TKIDLMDQGT NAVDILEGRG YKLRYPWVGV VNRSQADINK SVDMIAARRR ERDYFQTSPE YRHLTERMGS EYLGKMLSKH LEVVIKSRIP
301: GLQSLITKTI SELETELSRL GKPVAADAGG KLYMIMEICR AFDQTFKEHL DGTRSGGEKI NSVFDNQFPA AIKRLQFDKH LSMDNVRKLI TEADGYQPHL
401: IAPEQGYRRL IESCLVSIRG PAEAAVDAVH SILKDLIHKS MGETSELKQY PTLRVEVSGA AVDSLDRMRD ESRKATLLLV DMESGYLTVE FFRKLPQDSE
501: KGGNPTHSIF DRYNDAYLRR IGSNVLSYVN MVCAGLRNSI PKSIVYCQVR EAKRSLLDIF FTELGQKEMS KLSKLLDEDP AVQQRRTSIA KRLELYRSAQ
601: TDIEAVAWSK

Arabidopsis Description

DRP1BDL1B [Source:UniProtKB/TrEMBL;Acc:A0A178VE87]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.