Factsheet for Zm00001d031667_P006

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004245_P003
Zm00001d009353_P001
Zm00001d009504_P002
Zm00001d013705_P001
Zm00001d013996_P003
Zm00001d015278_P001
Zm00001d015981_P001
Zm00001d021087_P003
Zm00001d023982_P001
Zm00001d030661_P001
Zm00001d031667_P006
Zm00001d033283_P001
Zm00001d038955_P001
Zm00001d039404_P001
Zm00001d045530_P001
Zm00001d049871_P001
Zm00001d049872_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13300.1	Zm00001d013705_P001	AT3G63300.1	19363154
AT5G13300.1	Zm00001d030661_P001	AT3G63300.1	19363154
AT5G13300.1	Zm00001d033283_P001	AT3G63300.1	19363154
AT5G13300.1	Zm00001d004245_P003	AT5G13300.1	15743878
AT5G13300.1	Zm00001d009353_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d015278_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d015981_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d021087_P003	AT5G13300.1	15743878
AT5G13300.1	Zm00001d023982_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d031667_P006	AT5G13300.1	15743878
AT5G13300.1	Zm00001d049871_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d049872_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d013996_P003	AT5G26980.1	15743878
AT5G13300.1	Zm00001d039404_P001	AT5G26980.1	15743878
AT5G13300.1	Zm00001d045530_P001	AT5G26980.1	15743878
AT5G13300.1	Zm00001d009504_P002	AT5G42080.1	15923323
AT5G13300.1	Zm00001d038955_P001	AT5G42080.1	15923323

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80812	Sorghum	cytosol	96.72	96.6
Zm00001d049872_P001	Maize	cytosol	64.03	95.99
Zm00001d015981_P001	Maize	peroxisome	17.74	95.42
Zm00001d009353_P001	Maize	cytosol	13.37	90.91
Zm00001d049871_P001	Maize	cytosol	20.53	88.48
Zm00001d004245_P003	Maize	cytosol	19.93	85.42
Os08t0537600-01	Rice	plasma membrane	83.72	82.91
TraesCS7A01G263800.2	Wheat	cytosol	82.5	82.5
HORVU7Hr1G055220.21	Barley	cytosol	82.75	81.95
TraesCS7D01G264700.1	Wheat	endoplasmic reticulum	81.77	79.46
TraesCS7B01G161800.1	Wheat	endoplasmic reticulum	81.77	79.46
Zm00001d021087_P003	Maize	cytosol	76.55	75.27
CDX70496	Canola	cytosol	49.82	74.14
Solyc12g042180.1.1	Tomato	cytosol	19.81	72.77
Zm00001d016932_P001	Maize	endoplasmic reticulum	16.04	72.13
GSMUA_Achr11P...	Banana	cytosol	70.84	71.45
GSMUA_Achr4P00060_001	Banana	cytosol	70.35	69.18
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	16.04	69.11
KRH45201	Soybean	cytosol	67.07	67.07
PGSC0003DMT400005756	Potato	cytosol	66.46	66.95
VIT_01s0150g00030.t01	Wine grape	cytosol	67.31	66.59
Solyc05g023750.2.1	Tomato	cytosol	65.98	66.46
CDY09784	Canola	cytosol	64.03	66.04
AT5G13300.1	Thale cress	cytosol	65.49	65.18
CDX69650	Canola	cytosol	64.88	64.65
Bra008838.1-P	Field mustard	cytosol	64.64	64.41
CDX78515	Canola	cytosol	64.76	64.14
KRH01512	Soybean	cytosol	65.37	64.12
Bra006193.1-P	Field mustard	cytosol	63.06	63.84
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	55.29	61.49
VIT_17s0000g00310.t01	Wine grape	cytosol	60.27	59.98
Solyc03g118260.1.1	Tomato	cytosol	58.08	59.75
AT5G61980.1	Thale cress	cytosol	59.9	59.54
CDY00242	Canola	cytosol	56.14	58.7
Bra010046.1-P	Field mustard	cytosol	55.65	57.9
Bra029295.1-P	Field mustard	cytosol	60.39	57.66
CDY30689	Canola	cytosol	60.27	57.54
KRH63858	Soybean	cytosol	54.07	56.69
Zm00001d015278_P001	Maize	mitochondrion	22.96	56.25
KRH59741	Soybean	cytosol	54.07	55.62
CDX86943	Canola	cytosol	47.63	55.06
PGSC0003DMT400036762	Potato	cytosol	38.64	54.45
Solyc12g042170.1.1	Tomato	cytosol	35.6	54.06
KRH54108	Soybean	cytosol	45.69	50.95
Zm00001d023982_P001	Maize	cytosol	22.11	46.79
Zm00001d051187_P009	Maize	plastid	36.82	42.98
CDY53619	Canola	cytosol	17.01	41.54
Zm00001d051188_P001	Maize	cytosol	5.83	36.36
Zm00001d032879_P001	Maize	extracellular	9.11	34.56
Zm00001d021802_P001	Maize	cytosol	11.18	19.21
Zm00001d006602_P001	Maize	cytosol	11.3	18.75
Zm00001d034885_P002	Maize	cytosol	7.53	14.9
Zm00001d012827_P002	Maize	cytosol	7.41	14.49
Zm00001d007856_P001	Maize	cytosol	4.74	14.34
Zm00001d047020_P002	Maize	cytosol	7.65	14.32
Zm00001d030031_P002	Maize	plastid	8.38	14.29
Zm00001d047793_P001	Maize	extracellular, plasma membrane	7.29	13.24
Zm00001d028656_P001	Maize	mitochondrion	7.17	13.0
Zm00001d046873_P001	Maize	cytosol, plastid	8.26	12.78
Zm00001d016547_P001	Maize	cytosol, plastid	8.26	12.78
Zm00001d051030_P001	Maize	cytosol, plastid	8.26	12.78
CDY08879	Canola	cytosol	2.67	6.98

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	EntrezGene:100383138	MapMan:22.3.4.1	Gene3D:3.30.40.160	InterPro:AGD1/2/3/4_BAR_plant
InterPro:AH/BAR_dom_sf	InterPro:ARFGAP/RecO	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	InterPro:BAR_dom	EMBL:BT066344	UniProt:C0PDH5	ncoils:Coil	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164
InterPro:IPR001849	InterPro:IPR002110	InterPro:IPR004148	InterPro:IPR020683	InterPro:IPR027267	InterPro:IPR036770
InterPro:IPR038508	ProteinID:ONM03405.1	ProteinID:ONM03408.1	PFAM:PF00169	PFAM:PF01412	PFAM:PF12796
PFAM:PF16746	InterPro:PH_domain	PRINTS:PR00405	PFscan:PS50003	PFscan:PS50088	PFscan:PS50115
PFscan:PS50297	PANTHER:PTHR23180	PANTHER:PTHR23180:SF242	SMART:SM00105	SMART:SM00233	SMART:SM00248
SMART:SM00721	SUPFAM:SSF103657	SUPFAM:SSF48403	SUPFAM:SSF50729	SUPFAM:SSF57863	UniParc:UPI000195C9A7
EnsemblPlantsGene:Zm00001d031667	EnsemblPlants:Zm00001d031667_P006	EnsemblPlants:Zm00001d031667_T006	SEG:seg	:	:

Description

Discolored-paralog2 Discolored-paralog2

Coordinates

chr1:-:198119172..198130785

Molecular Weight (calculated)

92956.9 Da

IEP (calculated)

7.096

GRAVY (calculated)

-0.559

Length

823 amino acids

Sequence
(BLAST)

001: MYFAKLDDSP MFRTQIQSLE ESAELLRERC LKFHKGCRKY TEGLGEAYDG DIAFASSLET FGGGHNDPMS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HMLNDRLLNF VDIDLHDVKD AHKRFDKASL SYDQIREKYL SLKKGTRPDI TTAIEDELHS ARSSFEQARF NLVTSLSHVE AKKRFEFLEA VSATMDSHLR
201: YFKQGYELLH QMEPYINQIL AYAQQSRERA NKEQASLVER MHEYKRQIDR ESRSSINGLN DSYNGDRMQT IGRSSHKQIE AVMQSTSKGK VETIRQGYLS
301: KRSSNLRADW KRRFFVLDSR GMLYYYRKQI TRPPAGCSMQ RNVNPPEHGS GLLSRLFSSH YHIHDEKSVA RHTVNLLTST IKVDAEQSDL RFCFRIISPT
401: KIYTLQAESA VDQMDWIEKI TGVIASLLSS QSPEQCFMSS PKGSGHDRST SDGSSFTSSV EFEPSVIDDL VLEKYSGNGQ HDVIRGTHHH RTSMKPEKPI
501: DLLRKVDGNN MCADCGALEP DWASLNLGAL LCIECSGVHR NLGVHISKVR SLTLDVRVWE PSVINLFQSL GNMFVNNIWE DMLPDDNSSA DGSDTSQYLS
601: VSKPKHKDVF SAKEKFIHAK YVDKEFIRKR SMDENQLAEQ MWNSVAANDK KTAYSLIVRS RANVNLVYGE MPSSPFLTLG KALQQEQPVS PPDGSPKFFD
701: CNSHDKISPR EPLSPASTSS RTDDMEDGCE GLSLLHLACR VADVGMVELL LQYGASVNMN DSRGRTPLHH CILKGRHRHA KLLLSRGADS QAMDRDGRTA
801: LQYAIDGGTS DEDILALLED HSR

Best Arabidopsis Sequence Match ( AT5G13300.1 )
(BLAST)

001: MHFTKLDDSP MFRKQLQSME ESAEILRERS LKFYKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC

Arabidopsis Description

AGD3ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.