Factsheet for TraesCS2D01G212100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G203600.1	Wheat	cytosol	97.26	97.26
TraesCS2B01G230900.1	Wheat	cytosol	97.05	97.05
CDY71222	Canola	cytosol	17.26	85.42
Os07t0563800-02	Rice	cytosol	77.89	77.73
EER99548	Sorghum	cytosol	77.05	77.38
Zm00001d021802_P001	Maize	cytosol	74.32	73.7
Zm00001d006602_P001	Maize	cytosol	75.16	71.98
GSMUA_Achr4P23780_001	Banana	cytosol	53.47	53.36
GSMUA_Achr1P08800_001	Banana	cytosol	51.79	51.46
VIT_00s0404g00040.t01	Wine grape	cytosol	48.84	45.76
PGSC0003DMT400012918	Potato	cytosol	35.58	36.34
Solyc03g006610.2.1	Tomato	cytosol	35.58	36.27
TraesCS1D01G196700.1	Wheat	cytosol	16.21	19.01
TraesCS5D01G554100.1	Wheat	cytosol, nucleus, peroxisome, plastid	15.16	17.39
TraesCS4D01G205800.1	Wheat	mitochondrion	16.0	16.24
TraesCS7D01G264700.1	Wheat	endoplasmic reticulum	18.53	10.39
TraesCS5D01G300300.2	Wheat	cytosol	18.32	10.36
TraesCS6D01G213800.1	Wheat	cytosol	16.0	9.96

Protein Annotations

EnsemblPlants:TraesCS2D01G212100.1	EnsemblPlantsGene:TraesCS2D01G212100	Gene3D:3.30.40.160	GO:GO:0003674	GO:GO:0005096	GO:GO:0008150
GO:GO:0030234	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	InterPro:IPR001164	InterPro:IPR038508
PANTHER:PTHR23180	PANTHER:PTHR23180:SF160	PFAM:PF01412	PFscan:PS50115	PRINTS:PR00405	SEG:seg
SMART:SM00105	SUPFAM:SSF57863	MapMan:22.3.4.2	:	:	:

Description

No Description!

Coordinates

chr2D:-:170448622..170453885

Molecular Weight (calculated)

50716.4 Da

IEP (calculated)

9.596

GRAVY (calculated)

-0.615

Length

475 amino acids

Sequence
(BLAST)

001: MNEKASVSKE LNARHKKILE GLLRLPENRE CADCKSKGPR WASVNIGIFV CMQCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIQSMGNE KANGYWEAEL
101: PPNYDRVGIE NFIRAKYEDK RWIPRNGTSK LPSGARDEKS SESQASHANR GGHAQKPSFE QHRVSPAATK RTVPVASRMH TQASPQPKAE LPVPKVASPP
201: QPAKSPAKVD VTPPKVHQPS VAPPPKVDYA IDLFNMLSMD GTTEKESESS SNDDSAWDGF QSAEPAPNSE KKGTAKPVES KVQSTSGIED LFKDSPAVAA
301: SSAPVASKSN PQTDIMSLFE KSNMVSPFAI HQQQLAFMTQ QQALLMAALK SGNAPQMAPG NVPQMVPGNA SVLNTNGSNA PNGSLPSHSW PNLGYQNPAS
401: IPAAAPQNGV AKAVNNNQDF FSGNFGFGSP GMPANGATTA GANKSASTPT SSTLPSQSGK EYDFSSLTQG MFSKR

Best Arabidopsis Sequence Match ( AT5G54310.1 )
(BLAST)

001: MNEKANVSKE LNARHRKILE GLLKHPENRE CADCKTKGPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIQSMGND KANSYWEAEL
101: PPNYDRVGIE NFIRAKYEEK RWVSRGEKAR SPPRVEQERR KSVERSGPGY EHGHSSSPVN LFEERKTIPA SRTRNNVAAT RINLPVPPQG PSQVIKPQQK
201: MESAATPVER EKQAVNVAPA SDPPKVDFAT DLFNMLSMDD STTNTSEATP GDTPADDNSW AGFQSAGSGQ TAEKIVTAKP AESSSPPASS SDFEDLFKDT
301: PNLTTQQAPK DVKGDIMSLF EKTNIVSPFA MHQQQVAMLA QQQALYMAAA KAAGGTPNGV NQQAIANALN VASANWSNPG GYQIPGMTNP VGGQADLQKL
401: MQNMNMNANM NTRPAQPQEN TLQYPSSSFY TMGQANQVNG MTPNSTGKPQ SSSATQPTST TPSSQSGKDF DFSSLMDGMF TKH

Arabidopsis Description

AGD5Nevershed [Source:UniProtKB/TrEMBL;Acc:C4NZX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.