Factsheet for Bra005187.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 3
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74953	Canola	cytosol	87.53	85.4
Bra000005.1-P	Field mustard	mitochondrion	82.54	76.31
Bra017179.1-P	Field mustard	cytosol	75.96	75.96
Bra026910.1-P	Field mustard	plastid	29.71	72.38
Bra007020.1-P	Field mustard	cytosol	69.61	67.62
Bra039812.1-P	Field mustard	cytosol	68.48	66.96
Bra024999.1-P	Field mustard	cytosol	18.37	22.19
Bra013265.1-P	Field mustard	cytosol	19.73	22.08
Bra017330.1-P	Field mustard	cytosol	17.46	19.54
Bra021263.1-P	Field mustard	cytosol	12.02	19.34
Bra029030.1-P	Field mustard	cytosol	19.5	17.99
Bra002995.1-P	Field mustard	cytosol	18.82	17.51
Bra022711.1-P	Field mustard	cytosol	17.01	15.89
Bra012634.1-P	Field mustard	cytosol	20.86	8.99
Bra006193.1-P	Field mustard	cytosol	15.19	8.24
Bra008838.1-P	Field mustard	cytosol	14.97	7.99
Bra019896.1-P	Field mustard	cytosol	13.38	7.66
Bra010046.1-P	Field mustard	cytosol	13.38	7.46
Bra027124.1-P	Field mustard	cytosol	12.02	6.96
Bra029295.1-P	Field mustard	cytosol	13.61	6.96

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	EnsemblPlantsGene:Bra005187
EnsemblPlants:Bra005187.1	EnsemblPlants:Bra005187.1-P	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR038508	UniProt:M4CLV0
PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF35	SMART:SM00105
SUPFAM:SSF57863	UniParc:UPI0002547997	SEG:seg	:	:	:

Description

AT3G53710 (E=2e-131) AGD6 | AGD6; ARF GTPase activator/ DNA binding / zinc ion binding

Coordinates

chrA05:+:3895384..3897595

Molecular Weight (calculated)

47465.5 Da

IEP (calculated)

7.857

GRAVY (calculated)

-0.726

Length

441 amino acids

Sequence
(BLAST)

001: MAAAIRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMESGGNERL NGFLAQYGIA KETEIVAKYN
101: SNAASVYRDR IQAVAEGRQW RDPAVVKEVV VNKKPPLQGS NGGWDDWDND DSFRSPRRNQ SASDFRGYGG GGGGGAPAKS KSSEDIYSRT QLEASAANKE
201: SFFAKRMAEN ESKPEGLPPS RGGKYVGFGS SPGPAPRSNQ QSGGDVFSVV SEGFGRLSLV AASAANVVQT GTMDFTSKVK EGGLDNTVSE TVNVVASKTT
301: EIGQRTWGIM RGVMAIASQK VEEFTKEEAS TWNQQNKSEG NGYTNSSLGG SQSSSSYQNN YCSNSNSWDN WGEENSTTKK EAAPKVSQSS SGGHHNSYGN
401: SNSWDDWGEE KSTTKKEAAP KATMGNQTLL GLVEVFSSGV S

Best Arabidopsis Sequence Match ( AT2G37550.1 )
(BLAST)

001: MAAARRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMDAGGNERL NNFLAQYGIS KETDIISKYN
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL

Arabidopsis Description

AGD7ADP-ribosylation factor GTPase-activating protein AGD7 [Source:UniProtKB/Swiss-Prot;Acc:O80925]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.