Factsheet for Bra000005.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
golgi 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07784	Canola	mitochondrion	89.94	99.08
AT2G37550.1	Thale cress	mitochondrion	82.81	86.62
Bra005187.1-P	Field mustard	cytosol	76.31	82.54
Bra026910.1-P	Field mustard	plastid	28.72	75.69
Bra007020.1-P	Field mustard	cytosol	71.07	74.67
Bra017179.1-P	Field mustard	cytosol	68.76	74.38
Bra039812.1-P	Field mustard	cytosol	69.81	73.84
Bra024999.1-P	Field mustard	cytosol	17.82	23.29
Bra013265.1-P	Field mustard	cytosol	18.66	22.59
Bra021263.1-P	Field mustard	cytosol	11.95	20.8
Bra017330.1-P	Field mustard	cytosol	16.56	20.05
Bra029030.1-P	Field mustard	cytosol	18.87	18.83
Bra002995.1-P	Field mustard	cytosol	18.24	18.35
Bra022711.1-P	Field mustard	cytosol	16.98	17.16
Bra012634.1-P	Field mustard	cytosol	20.34	9.48
Bra006193.1-P	Field mustard	cytosol	14.05	8.24
Bra008838.1-P	Field mustard	cytosol	13.84	7.99
Bra010046.1-P	Field mustard	cytosol	13.21	7.96
Bra019896.1-P	Field mustard	cytosol	12.58	7.79
Bra029295.1-P	Field mustard	cytosol	13.63	7.54
Bra027124.1-P	Field mustard	cytosol	11.32	7.1

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	EnsemblPlantsGene:Bra000005
EnsemblPlants:Bra000005.1	EnsemblPlants:Bra000005.1-P	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR038508	UniProt:M4C727
PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF35	SMART:SM00105
SUPFAM:SSF57863	UniParc:UPI0002540002	SEG:seg	:	:	:

Description

AT2G37550 (E=2e-159) ASP1, AGD7 | AGD7; ARF GTPase activator/ DNA binding / zinc ion binding

Coordinates

chrA03:-:8798081..8800123

Molecular Weight (calculated)

51603.6 Da

IEP (calculated)

6.290

GRAVY (calculated)

-0.934

Length

477 amino acids

Sequence
(BLAST)

001: MAAARRLRTL QSQAENKVCV DCSQKNPQWA SVSYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMESGGNERL NKFLALYGIS KETDIVAKYN
101: SNAASVYRDR IQALAEGRQW RDPPVVKESV SVSKKKPPLG NGNNNGGWDD WEADDSFRSS SDMRRNQSAS DFRASGGRGA PAKSKSSEDI YSRSQLEASA
201: ANKESFFAKR MAENENKPEG LPPSQGGKYV GFGSSPGPAP RSNYQGGGGG GDVFSVMSEG FGRLSLVAAS AANVVQTGTM EFTSKVKEGG LDHTVSETVN
301: VVASKTTETG QRTWGIMKGV MAIASQKVEE FTKEEASTWN QQNTNEGNGY YQNKAATNSS LGGSQSSSSY QNNKRSSWDD WGEENNTKKE TASQSGYHNS
401: HGNSSSWDDW GEEKNNTKKE TAPKVSTSND DDGWAGWGDN DGKDDDDDGY YQSAAGDKKS VGHNGKSDTA WTGGGFL

Best Arabidopsis Sequence Match ( AT2G37550.1 )
(BLAST)

001: MAAARRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMDAGGNERL NNFLAQYGIS KETDIISKYN
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL

Arabidopsis Description

AGD7ADP-ribosylation factor GTPase-activating protein AGD7 [Source:UniProtKB/Swiss-Prot;Acc:O80925]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.