Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022711.1-P | Field mustard | cytosol | 92.09 | 96.19 |
| CDY52243 | Canola | cytosol | 89.86 | 94.06 |
| CDY63834 | Canola | cytosol | 82.56 | 85.86 |
| CDY43044 | Canola | cytosol | 80.73 | 83.26 |
| CDY64205 | Canola | endoplasmic reticulum | 82.56 | 82.56 |
| CDY43831 | Canola | cytosol | 80.12 | 81.95 |
| AT5G54310.1 | Thale cress | cytosol | 79.11 | 80.75 |
| CDY71222 | Canola | cytosol | 14.81 | 76.04 |
| VIT_19s0014g03510.t01 | Wine grape | cytosol | 57.2 | 59.0 |
| Solyc07g063550.2.1 | Tomato | cytosol | 53.55 | 55.58 |
| PGSC0003DMT400049649 | Potato | cytosol | 53.14 | 55.16 |
| KRH22157 | Soybean | cytosol | 53.55 | 54.89 |
| KRH27179 | Soybean | cytosol | 52.94 | 53.93 |
| KRH26038 | Soybean | cytosol | 54.16 | 53.4 |
| PGSC0003DMT400064425 | Potato | cytosol | 47.06 | 49.26 |
| KRH30767 | Soybean | nucleus | 23.12 | 46.91 |
| Solyc10g006850.2.1 | Tomato | cytosol | 47.06 | 46.4 |
| KRH55419 | Soybean | cytosol | 48.28 | 46.12 |
| CDX92147 | Canola | cytosol | 20.69 | 40.16 |
| CDX95838 | Canola | cytosol | 20.49 | 39.76 |
| Zm00001d016547_P001 | Maize | cytosol, plastid | 27.38 | 25.38 |
| Zm00001d046873_P001 | Maize | cytosol, plastid | 27.38 | 25.38 |
| Zm00001d051030_P001 | Maize | cytosol, plastid | 27.38 | 25.38 |
| CDX77687 | Canola | cytosol | 15.21 | 18.66 |
| CDY07784 | Canola | mitochondrion | 16.23 | 18.48 |
| CDY58500 | Canola | cytosol | 15.01 | 18.45 |
| CDY44506 | Canola | cytosol | 14.6 | 18.18 |
| CDY01499 | Canola | cytosol | 14.81 | 17.94 |
| CDX78809 | Canola | cytosol | 14.2 | 17.9 |
| CDX90439 | Canola | cytosol | 14.81 | 17.8 |
| CDX76193 | Canola | cytosol | 16.23 | 17.74 |
| CDY69342 | Canola | mitochondrion | 15.62 | 17.58 |
| CDX78196 | Canola | cytosol | 15.82 | 17.53 |
| CDX79739 | Canola | mitochondrion | 16.02 | 17.44 |
| CDY30849 | Canola | cytosol | 15.62 | 17.19 |
| CDY18435 | Canola | cytosol | 14.6 | 17.06 |
| CDX74953 | Canola | cytosol | 15.62 | 17.04 |
| CDX73533 | Canola | cytosol | 15.21 | 16.82 |
| CDY59045 | Canola | cytosol | 13.39 | 16.79 |
| CDY53619 | Canola | cytosol | 9.53 | 13.95 |
| CDY23645 | Canola | cytosol | 3.85 | 11.73 |
| CDX86943 | Canola | cytosol | 15.62 | 10.81 |
| CDY16083 | Canola | cytosol | 5.07 | 10.59 |
| CDY26647 | Canola | plastid | 3.85 | 10.5 |
| CDY19326 | Canola | cytosol | 16.02 | 10.27 |
| CDX97917 | Canola | cytosol | 15.62 | 10.01 |
| CDY00242 | Canola | cytosol | 15.42 | 9.66 |
| CDY08879 | Canola | cytosol | 6.09 | 9.52 |
| CDY09784 | Canola | cytosol | 15.42 | 9.52 |
| CDX69650 | Canola | cytosol | 15.42 | 9.2 |
| CDX78515 | Canola | cytosol | 15.42 | 9.15 |
| CDY30689 | Canola | cytosol | 15.62 | 8.93 |
| CDY40502 | Canola | cytosol | 13.59 | 8.78 |
| CDY54764 | Canola | cytosol | 13.18 | 8.53 |
| CDX70496 | Canola | cytosol | 6.09 | 5.42 |
| CDX86944 | Canola | cytosol | 0.2 | 0.76 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | GO:A0A078GUC9 | UniProt:A0A078GUC9 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom |
| InterPro:ArfGAP_dom_sf | EnsemblPlants:CDY28774 | ProteinID:CDY28774 | ProteinID:CDY28774.1 | GO:GO:0003674 | GO:GO:0005096 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00041422001 |
| InterPro:IPR001164 | InterPro:IPR038508 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50115 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF160 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0004EF4413 | SEG:seg | : |
Description
BnaA02g09660DBnaA02g09660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUC9]
Coordinates
chrLK032226:+:191377..194462
Molecular Weight (calculated)
53711.6 Da
IEP (calculated)
7.178
GRAVY (calculated)
-0.412
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MICVENFDSF SCCCLFLRGF FLFGLVYRLN IPLVLLLQIL EGLLKHPENR ECADCKTKGP RWASVNLGIF ICMQCSGIHR SLGVHISKVR SATLDTWLPE
101: QVAFIQSMGN ERANSYWEAE LPPNYDRVGI ENFIRAKYEE KRWVSKGEKA RSPPRVEQAR RSMERTVPGY EHGHTSSPPV NLFEEKKAVQ APRTRYSVSA
201: TRISLPVPPQ GPAQVIKPQQ KVESVETTKA AVNVAPAPEP PKVDFATDLF DMLSMDEPTA NTSEAVPADD NWAGFQSAGN GQTVEKSVAA KPDEISSPPA
301: TGIEDLFKDT PTLVAQQTPQ KDVKGDIMSL FEKTNIVSPF AMHQQQVAML AQQQALYMAA AKAAGGTPNG SNQQAVANAL LASANWSNTG YQIPGMTNPG
401: GGQADHLQKL MQNMNMNANM NVRPAQPQAS TPQYPVSSFY TTGQANPAAN GMTPNTTVKP QSSSSSATST TPSSQTGKDF DFSSLMDGMF TKH
101: QVAFIQSMGN ERANSYWEAE LPPNYDRVGI ENFIRAKYEE KRWVSKGEKA RSPPRVEQAR RSMERTVPGY EHGHTSSPPV NLFEEKKAVQ APRTRYSVSA
201: TRISLPVPPQ GPAQVIKPQQ KVESVETTKA AVNVAPAPEP PKVDFATDLF DMLSMDEPTA NTSEAVPADD NWAGFQSAGN GQTVEKSVAA KPDEISSPPA
301: TGIEDLFKDT PTLVAQQTPQ KDVKGDIMSL FEKTNIVSPF AMHQQQVAML AQQQALYMAA AKAAGGTPNG SNQQAVANAL LASANWSNTG YQIPGMTNPG
401: GGQADHLQKL MQNMNMNANM NVRPAQPQAS TPQYPVSSFY TTGQANPAAN GMTPNTTVKP QSSSSSATST TPSSQTGKDF DFSSLMDGMF TKH
001: MNRKASVSKE LNAKHSKILE ALLKHPDNRE CADCRSKAPR WASVNLGIFI CMQCSGIHRS LGVHISQVRS ITLDTWLPDQ VAFMKSTGNA KGNEYWESEL
101: PQHFERSSSD TFIRAKYSEK RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR TRAGSVDMKE NVYVVPLPEF
201: KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FD
101: PQHFERSSSD TFIRAKYSEK RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR TRAGSVDMKE NVYVVPLPEF
201: KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FD
Arabidopsis Description
AGD15ARF-GAP domain 15 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.