Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007020.1-P | Field mustard | cytosol | 98.65 | 96.7 |
| CDX73533 | Canola | cytosol | 94.83 | 94.62 |
| CDY30849 | Canola | cytosol | 86.52 | 85.94 |
| CDX76193 | Canola | cytosol | 86.74 | 85.59 |
| AT3G53710.2 | Thale cress | cytosol | 84.94 | 82.35 |
| CDY07784 | Canola | mitochondrion | 73.03 | 75.06 |
| CDX79739 | Canola | mitochondrion | 75.73 | 74.39 |
| CDY69342 | Canola | mitochondrion | 70.34 | 71.46 |
| CDX74953 | Canola | cytosol | 71.91 | 70.8 |
| CDY23645 | Canola | cytosol | 25.62 | 70.37 |
| CDY16083 | Canola | cytosol | 35.28 | 66.53 |
| CDY18435 | Canola | cytosol | 58.2 | 61.37 |
| CDY26647 | Canola | plastid | 24.72 | 60.77 |
| CDY71222 | Canola | cytosol | 8.09 | 37.5 |
| CDX95838 | Canola | cytosol | 12.58 | 22.05 |
| CDY01499 | Canola | cytosol | 20.0 | 21.87 |
| CDX90439 | Canola | cytosol | 20.0 | 21.71 |
| CDX92147 | Canola | cytosol | 12.36 | 21.65 |
| CDY44506 | Canola | cytosol | 19.1 | 21.46 |
| CDX78809 | Canola | cytosol | 18.65 | 21.23 |
| CDX77687 | Canola | cytosol | 19.1 | 21.14 |
| CDY59045 | Canola | cytosol | 18.43 | 20.87 |
| CDY58500 | Canola | cytosol | 18.65 | 20.7 |
| CDY63834 | Canola | cytosol | 18.65 | 17.51 |
| CDY43831 | Canola | cytosol | 18.88 | 17.43 |
| CDY43044 | Canola | cytosol | 18.65 | 17.36 |
| CDY52243 | Canola | cytosol | 17.98 | 16.99 |
| CDY64205 | Canola | endoplasmic reticulum | 18.43 | 16.63 |
| CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 17.53 | 15.82 |
| CDY53619 | Canola | cytosol | 9.44 | 12.46 |
| CDY08879 | Canola | cytosol | 8.31 | 11.75 |
| CDY09784 | Canola | cytosol | 15.51 | 8.65 |
| CDX78515 | Canola | cytosol | 15.73 | 8.42 |
| CDX69650 | Canola | cytosol | 15.51 | 8.35 |
| CDX86943 | Canola | cytosol | 13.26 | 8.29 |
| CDY00242 | Canola | cytosol | 13.48 | 7.62 |
| CDX97917 | Canola | cytosol | 12.58 | 7.28 |
| CDY30689 | Canola | cytosol | 13.93 | 7.19 |
| CDY19326 | Canola | cytosol | 12.36 | 7.15 |
| CDY54764 | Canola | cytosol | 11.01 | 6.43 |
| CDY40502 | Canola | cytosol | 10.56 | 6.16 |
| CDX70496 | Canola | cytosol | 6.07 | 4.88 |
| CDX86944 | Canola | cytosol | 0.67 | 2.29 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | GO:A0A078CLX1 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf |
| EnsemblPlants:CDX78196 | ProteinID:CDX78196 | ProteinID:CDX78196.1 | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0008150 |
| GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00129510001 | InterPro:IPR001164 | InterPro:IPR038508 | PFAM:PF01412 | PRINTS:PR00405 |
| PFscan:PS50115 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF35 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0004EE0B94 |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g33910D
Coordinates
chrLK031814:-:1670782..1673375
Molecular Weight (calculated)
47923.8 Da
IEP (calculated)
9.083
GRAVY (calculated)
-0.879
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAARKLRT LQSQPDNKVC VDCAQKNPQW ASVSYGIFMC LECSGKHRGL GVHISFVRSV TMDSWSEIQI KKMEAGGNER LNSFLAQYGI AKETDIVSKY
101: NSNAAAVYRN RVQALAEGKP WSDPPVVKEA KKPPLGNGGN GGWDSWGNDD SYRSRTDMRR NQSENDFRGL GGGGGGAPVK SKSSEDIYTR SQLEASAAGK
201: ESFFARRMAE NESKPEGLPP SQGGKYVGFG SGSGSVPRSN QQDDVYSVVS QGFGRLSMVA ASAASVVQTG TKEFTSKVKE GGYDHKVSET VNVVASKTTE
301: IGQRTWGIMK GVMAIASQKV GEYTKEGKTT SWNQRNESES NGYYQNFGNG NKAANPSVEG RGSQSSSSGY YNNSHKSNSW DDWGENESKK KEAVASKGSS
401: ASNDDDGWTG WDDPKDDVYY QSAGDKKSAG HNGKSNTAWT GGGFQ
101: NSNAAAVYRN RVQALAEGKP WSDPPVVKEA KKPPLGNGGN GGWDSWGNDD SYRSRTDMRR NQSENDFRGL GGGGGGAPVK SKSSEDIYTR SQLEASAAGK
201: ESFFARRMAE NESKPEGLPP SQGGKYVGFG SGSGSVPRSN QQDDVYSVVS QGFGRLSMVA ASAASVVQTG TKEFTSKVKE GGYDHKVSET VNVVASKTTE
301: IGQRTWGIMK GVMAIASQKV GEYTKEGKTT SWNQRNESES NGYYQNFGNG NKAANPSVEG RGSQSSSSGY YNNSHKSNSW DDWGENESKK KEAVASKGSS
401: ASNDDDGWTG WDDPKDDVYY QSAGDKKSAG HNGKSNTAWT GGGFQ
001: MAATRQLRTL QSQPENKVCV DCAQKNPQWA SVSYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSAIQIK KMEAGGNERL NKFFAQYGIA KETDIISKYN
101: SNAASVYRDR IQALAEGRPW NDPPVVKEAN KKPPLAQGGY GNNNNNNNGG WDSWDNDDSY KSDMRRNQSA NDFRASGNRE GAHVKSKSSE DIYTRSQLEA
201: SAAGKESFFA RRMAENESKP EGLPPSQGGK YVGFGSSSAP PPRNNQQDDV FSVVSQGFGR LSLVAASAAQ SAASVVQTGT KEFTSKVKEG GYDHKVSETV
301: NVVANKTTEI GHRTWGIMKG VMAMATQKVE EFTKEGSTSW NQQSENEGNG YYQNFGNGNK AANSSVGGGR PQSSSTSGHY NNSQNSNSWD SWGENENKKT
401: EAVAPKGSSA SNDDDGWTGW DDHDAKDDGF DGHYQSAGDK KSAGHNGKSD TAWTGGGFL
101: SNAASVYRDR IQALAEGRPW NDPPVVKEAN KKPPLAQGGY GNNNNNNNGG WDSWDNDDSY KSDMRRNQSA NDFRASGNRE GAHVKSKSSE DIYTRSQLEA
201: SAAGKESFFA RRMAENESKP EGLPPSQGGK YVGFGSSSAP PPRNNQQDDV FSVVSQGFGR LSLVAASAAQ SAASVVQTGT KEFTSKVKEG GYDHKVSETV
301: NVVANKTTEI GHRTWGIMKG VMAMATQKVE EFTKEGSTSW NQQSENEGNG YYQNFGNGNK AANSSVGGGR PQSSSTSGHY NNSQNSNSWD SWGENENKKT
401: EAVAPKGSSA SNDDDGWTGW DDHDAKDDGF DGHYQSAGDK KSAGHNGKSD TAWTGGGFL
Arabidopsis Description
AGD6Probable ADP-ribosylation factor GTPase-activating protein AGD6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M354]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.