Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017179.1-P | Field mustard | cytosol | 99.76 | 95.46 |
| CDX74953 | Canola | cytosol | 74.64 | 69.69 |
| CDY69342 | Canola | mitochondrion | 71.8 | 69.18 |
| CDY07784 | Canola | mitochondrion | 69.43 | 67.67 |
| CDY16083 | Canola | cytosol | 37.44 | 66.95 |
| CDY23645 | Canola | cytosol | 25.59 | 66.67 |
| CDY26647 | Canola | plastid | 28.2 | 65.75 |
| CDX79739 | Canola | mitochondrion | 69.67 | 64.9 |
| CDX73533 | Canola | cytosol | 62.56 | 59.19 |
| CDY30849 | Canola | cytosol | 62.56 | 58.93 |
| CDX76193 | Canola | cytosol | 62.56 | 58.54 |
| CDX78196 | Canola | cytosol | 61.37 | 58.2 |
| CDY71222 | Canola | cytosol | 8.77 | 38.54 |
| CDX95838 | Canola | cytosol | 14.46 | 24.02 |
| CDX92147 | Canola | cytosol | 14.22 | 23.62 |
| CDY44506 | Canola | cytosol | 21.33 | 22.73 |
| CDY01499 | Canola | cytosol | 21.8 | 22.6 |
| CDX78809 | Canola | cytosol | 20.85 | 22.51 |
| CDX90439 | Canola | cytosol | 21.8 | 22.44 |
| CDX77687 | Canola | cytosol | 21.09 | 22.14 |
| CDY58500 | Canola | cytosol | 20.62 | 21.7 |
| CDY59045 | Canola | cytosol | 18.72 | 20.1 |
| CDY63834 | Canola | cytosol | 18.96 | 16.88 |
| CDY43044 | Canola | cytosol | 18.96 | 16.74 |
| CDY43831 | Canola | cytosol | 18.96 | 16.6 |
| CDY52243 | Canola | cytosol | 17.77 | 15.92 |
| CDY64205 | Canola | endoplasmic reticulum | 18.48 | 15.82 |
| CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 17.06 | 14.6 |
| CDY53619 | Canola | cytosol | 9.0 | 11.28 |
| CDY08879 | Canola | cytosol | 8.29 | 11.11 |
| CDX86943 | Canola | cytosol | 14.93 | 8.85 |
| CDY09784 | Canola | cytosol | 15.4 | 8.15 |
| CDY00242 | Canola | cytosol | 14.93 | 8.01 |
| CDX69650 | Canola | cytosol | 15.4 | 7.87 |
| CDX97917 | Canola | cytosol | 13.98 | 7.67 |
| CDX78515 | Canola | cytosol | 14.93 | 7.58 |
| CDY19326 | Canola | cytosol | 13.74 | 7.54 |
| CDY30689 | Canola | cytosol | 15.4 | 7.54 |
| CDY54764 | Canola | cytosol | 12.32 | 6.82 |
| CDY40502 | Canola | cytosol | 12.09 | 6.68 |
| CDX70496 | Canola | cytosol | 6.16 | 4.7 |
| CDX86944 | Canola | cytosol | 0.47 | 1.53 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | GO:A0A078FVH7 | UniProt:A0A078FVH7 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom |
| InterPro:ArfGAP_dom_sf | EnsemblPlants:CDY18435 | ProteinID:CDY18435 | ProteinID:CDY18435.1 | GO:GO:0003674 | GO:GO:0005096 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00005431001 |
| InterPro:IPR001164 | InterPro:IPR038508 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50115 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF35 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0004EE4218 | SEG:seg | : |
Description
BnaA04g21520DBnaA04g21520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FVH7]
Coordinates
chrLK032085:+:463749..465748
Molecular Weight (calculated)
45830.5 Da
IEP (calculated)
9.403
GRAVY (calculated)
-0.634
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATQRLRAL QSQPENKVCV DCSQKNPQWA SVSYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQLK KMDSGGNHKL NTFLSLHGIS KETEIVAKYS
101: SDAASVYRDR IQTLAEGRPW RDPPVAVSKK PPLSKGGGSD DSVMRRNQSE SDFRGVGTRG GALAKARSSG DIYSRSEVEA SAASKESFFA RRMAENECKP
201: EGLPPSRGGK YVGFGSSPGP VTRRGDGGDV FSVVSEGFGR LSLVAASAAN VVQTGTMELT SKVKEGGLDN TVSETVNVVA SKTTEIGQRT WGIMKGVMAI
301: ASQKVEEFTK EEASTWNQQN NNGFSDSKAG TNSSSSYQNN YRNSMSQSVH HNGYGNANSW DDWGEEKSST KKEAAPKLGQ VEVFSSGEMV KEVVKLREKQ
401: SMCVIRALSQ RDRAESGYYR SV
101: SDAASVYRDR IQTLAEGRPW RDPPVAVSKK PPLSKGGGSD DSVMRRNQSE SDFRGVGTRG GALAKARSSG DIYSRSEVEA SAASKESFFA RRMAENECKP
201: EGLPPSRGGK YVGFGSSPGP VTRRGDGGDV FSVVSEGFGR LSLVAASAAN VVQTGTMELT SKVKEGGLDN TVSETVNVVA SKTTEIGQRT WGIMKGVMAI
301: ASQKVEEFTK EEASTWNQQN NNGFSDSKAG TNSSSSYQNN YRNSMSQSVH HNGYGNANSW DDWGEEKSST KKEAAPKLGQ VEVFSSGEMV KEVVKLREKQ
401: SMCVIRALSQ RDRAESGYYR SV
001: MAAARRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMDAGGNERL NNFLAQYGIS KETDIISKYN
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL
Arabidopsis Description
AGD7ADP-ribosylation factor GTPase-activating protein AGD7 [Source:UniProtKB/Swiss-Prot;Acc:O80925]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.