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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002995.1-P Field mustard cytosol 99.79 99.79
CDY71222 Canola cytosol 18.78 92.71
CDY64205 Canola endoplasmic reticulum 95.36 91.68
CDY52243 Canola cytosol 88.61 89.17
CDY43044 Canola cytosol 88.4 87.66
CDY43831 Canola cytosol 86.92 85.48
AT5G54310.1 Thale cress cytosol 86.29 84.68
CDY28774 Canola endoplasmic reticulum, plasma membrane 85.86 82.56
VIT_19s0014g03510.t01 Wine grape cytosol 62.87 62.34
Solyc07g063550.2.1 Tomato cytosol 59.28 59.16
PGSC0003DMT400049649 Potato cytosol 59.28 59.16
KRH22157 Soybean cytosol 59.28 58.42
KRH27179 Soybean cytosol 59.07 57.85
KRH26038 Soybean cytosol 59.7 56.6
PGSC0003DMT400064425 Potato cytosol 51.69 52.02
KRH55419 Soybean cytosol 54.22 49.81
Solyc10g006850.2.1 Tomato cytosol 52.11 49.4
KRH30767 Soybean nucleus 25.32 49.38
CDX92147 Canola cytosol 24.05 44.88
CDX95838 Canola cytosol 24.05 44.88
Zm00001d051030_P001 Maize cytosol, plastid 29.75 26.5
Zm00001d016547_P001 Maize cytosol, plastid 29.75 26.5
Zm00001d046873_P001 Maize cytosol, plastid 29.75 26.5
CDY07784 Canola mitochondrion 18.35 20.09
CDX79739 Canola mitochondrion 18.35 19.21
CDY44506 Canola cytosol 16.03 19.19
CDY69342 Canola mitochondrion 17.72 19.18
CDY18435 Canola cytosol 16.88 18.96
CDX78809 Canola cytosol 15.61 18.93
CDX76193 Canola cytosol 17.93 18.85
CDX78196 Canola cytosol 17.51 18.65
CDX74953 Canola cytosol 17.72 18.58
CDY30849 Canola cytosol 17.51 18.53
CDX73533 Canola cytosol 16.88 17.94
CDY01499 Canola cytosol 15.4 17.94
CDX77687 Canola cytosol 15.19 17.91
CDX90439 Canola cytosol 15.4 17.8
CDY58500 Canola cytosol 14.98 17.71
CDY59045 Canola cytosol 14.13 17.05
CDY53619 Canola cytosol 11.39 16.02
CDY16083 Canola cytosol 6.54 13.14
CDY23645 Canola cytosol 4.43 12.96
CDY26647 Canola plastid 4.85 12.71
CDX86943 Canola cytosol 17.51 11.66
CDY09784 Canola cytosol 18.14 10.78
CDY00242 Canola cytosol 17.51 10.55
CDX78515 Canola cytosol 18.35 10.47
CDX69650 Canola cytosol 18.14 10.41
CDY19326 Canola cytosol 16.46 10.14
CDX97917 Canola cytosol 16.24 10.01
CDY30689 Canola cytosol 17.93 9.86
CDY08879 Canola cytosol 6.54 9.84
CDY40502 Canola cytosol 13.92 8.65
CDY54764 Canola cytosol 13.71 8.53
CDX70496 Canola cytosol 7.38 6.33
CDX86944 Canola cytosol 0.63 2.29
Protein Annotations
MapMan:22.3.4.2Gene3D:3.30.40.160GO:A0A078JEU6UniProt:A0A078JEU6InterPro:ARFGAP/RecOInterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sfEnsemblPlants:CDY63834ProteinID:CDY63834ProteinID:CDY63834.1GO:GO:0003674GO:GO:0005096
GO:GO:0005488GO:GO:0008150GO:GO:0030234GO:GO:0043547GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00039665001
InterPro:IPR001164InterPro:IPR038508PFAM:PF01412PRINTS:PR00405PFscan:PS50115PANTHER:PTHR23180
PANTHER:PTHR23180:SF160SMART:SM00105SUPFAM:SSF57863UniParc:UPI0004EE10C8SEG:seg:
Description
BnaA10g28740DBnaA10g28740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEU6]
Coordinates
chrLK034357:+:18075..21970
Molecular Weight (calculated)
51508.5 Da
IEP (calculated)
8.310
GRAVY (calculated)
-0.676
Length
474 amino acids
Sequence
(BLAST)
001: MNEKANVSKE LNARHRKILE GLLKHPENRE CADCKTKGPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIQSMGNE RANSYWEAEL
101: PPNYDRVGIE NFIRAKYEEK RWVSRGEKAR SPPRVEQERR RSVERTGPLY EHGHSSSPVN LFEEKKTVQA PRTRNSGSAT RISLPVPPQG PGQVIKPQQK
201: TESVAAPVET AKPAVNVPAP EPPKVDFATD LFNMLSMDEP TANTSEAAPA DDNSWAGFQS AGNGQTAEKS VTPKPDESSS PPATGIEDLF KDSPTLIAQQ
301: TPQKDVKGDI MSLFEKTNIV SPFAMHQQQV AMLAQQQALY MAAAAKAAGG IPNGVNQQAI ANALSLASAN WSNTGYQVPG MTNPGGGQAD LQKLMQNMNM
401: NVRPGQQQEN TLQYPMSSSY GTGQVNPATN GMTPNSTGKP QSSTSSQPTS TTPASQLSKD FDFSSLMDGM FTKH
Best Arabidopsis Sequence Match ( AT5G54310.1 )
(BLAST)
001: MNEKANVSKE LNARHRKILE GLLKHPENRE CADCKTKGPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIQSMGND KANSYWEAEL
101: PPNYDRVGIE NFIRAKYEEK RWVSRGEKAR SPPRVEQERR KSVERSGPGY EHGHSSSPVN LFEERKTIPA SRTRNNVAAT RINLPVPPQG PSQVIKPQQK
201: MESAATPVER EKQAVNVAPA SDPPKVDFAT DLFNMLSMDD STTNTSEATP GDTPADDNSW AGFQSAGSGQ TAEKIVTAKP AESSSPPASS SDFEDLFKDT
301: PNLTTQQAPK DVKGDIMSLF EKTNIVSPFA MHQQQVAMLA QQQALYMAAA KAAGGTPNGV NQQAIANALN VASANWSNPG GYQIPGMTNP VGGQADLQKL
401: MQNMNMNANM NTRPAQPQEN TLQYPSSSFY TMGQANQVNG MTPNSTGKPQ SSSATQPTST TPSSQSGKDF DFSSLMDGMF TKH
Arabidopsis Description
AGD5Nevershed [Source:UniProtKB/TrEMBL;Acc:C4NZX2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.