Factsheet for GSMUA_Achr2P17930_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr4P21160_001
GSMUA_Achr4P21170_001
GSMUA_Achr5P02990_001
GSMUA_Achr7P07730_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32580.1	GSMUA_Achr11P...	AT3G48150.1	21798944
AT2G35240.1	GSMUA_Achr4P21160_001	AT4G14740.1	21798944
AT2G35240.1	GSMUA_Achr4P21170_001	AT4G14740.1	21798944
AT2G35240.1	GSMUA_Achr5P02990_001	AT4G14740.1	21798944
AT2G35240.1	GSMUA_Achr7P07730_001	AT4G14740.1	21798944
AT2G35240.1	GSMUA_AchrUn_...	AT4G14740.1	21798944
AT2G35240.1	GSMUA_Achr11P...	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G032330.2	Barley	cytosol	37.07	88.07
CDX79529	Canola	cytosol	40.54	86.78
GSMUA_Achr4P27580_001	Banana	cytosol	49.03	86.39
GSMUA_Achr6P01260_001	Banana	cytosol	49.03	86.39
Os06t0116600-01	Rice	mitochondrion	54.83	86.06
TraesCS2D01G434600.1	Wheat	plastid	63.32	76.28
TraesCS2B01G457700.1	Wheat	plastid	62.55	75.7
EES11377	Sorghum	mitochondrion, plastid	62.93	75.46
Zm00001d026243_P002	Maize	extracellular	62.93	75.12
CDY58181	Canola	cytosol	48.26	74.4
TraesCS2A01G437600.1	Wheat	plastid	61.39	74.3
CDY37719	Canola	plastid	61.39	71.62
Bra017328.1-P	Field mustard	cytosol	51.35	71.51
CDY19491	Canola	plastid	63.71	71.43
VIT_05s0049g01500.t01	Wine grape	plastid	64.09	71.24
Bra021852.1-P	Field mustard	plastid	61.0	71.17
CDY23734	Canola	plastid	62.16	70.61
CDY17174	Canola	plastid	62.55	70.43
Bra005495.1-P	Field mustard	plastid	62.55	70.43
PGSC0003DMT400038117	Potato	plastid	62.16	69.7
Zm00001d045528_P001	Maize	mitochondrion	59.85	69.51
EER87743	Sorghum	mitochondrion	58.69	68.47
KRG92352	Soybean	mitochondrion, plastid	62.55	68.35
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	61.78	67.8
KRH31686	Soybean	mitochondrion	58.3	67.71
Solyc06g008220.2.1	Tomato	plastid	62.16	67.36
TraesCS7A01G050200.1	Wheat	mitochondrion	60.62	66.53
TraesCS4A01G437100.1	Wheat	mitochondrion	60.23	66.38
TraesCS7D01G045100.1	Wheat	mitochondrion, plastid	59.46	66.38
TraesCS6D01G007100.1	Wheat	mitochondrion	60.23	64.73
HORVU7Hr1G008880.2	Barley	plastid	59.85	64.58
AT1G32580.1	Thale cress	mitochondrion, plastid	55.98	63.32
TraesCS6A01G005300.1	Wheat	plastid	61.0	63.2
PGSC0003DMT400060429	Potato	plastid	56.37	62.39
TraesCS6B01G010000.1	Wheat	plastid	60.23	62.15
KRH34443	Soybean	plastid	62.93	61.74
Solyc05g054960.2.1	Tomato	plastid	55.6	61.54
HORVU6Hr1G002030.1	Barley	plastid	61.0	61.48
CDX84224	Canola	mitochondrion, plastid	54.44	61.3
Bra005357.1-P	Field mustard	plastid	55.21	61.11
CDY31675	Canola	plastid	55.21	61.11
AT2G35240.1	Thale cress	mitochondrion, plastid	54.44	60.78
Bra036402.1-P	Field mustard	mitochondrion, plastid	50.97	59.19
CDY65831	Canola	mitochondrion, plastid	50.97	59.19
HORVU5Hr1G072150.9	Barley	mitochondrion	38.61	58.14
Bra017613.1-P	Field mustard	plastid	15.06	57.35
CDX79597	Canola	plastid	45.95	51.07
HORVU1Hr1G057120.1	Barley	plastid	29.73	50.33
Bra023005.1-P	Field mustard	endoplasmic reticulum	16.99	47.31
TraesCS3A01G476100.2	Wheat	plastid	32.43	47.19
CDX84615	Canola	mitochondrion	28.57	41.34
GSMUA_Achr8P33150_001	Banana	cytosol	19.69	36.69
GSMUA_Achr11P...	Banana	mitochondrion	34.75	35.57
HORVU2Hr1G040170.17	Barley	mitochondrion	37.45	35.53
GSMUA_Achr8P22480_001	Banana	mitochondrion	32.82	32.82
GSMUA_Achr6P08230_001	Banana	mitochondrion	32.43	20.74
GSMUA_AchrUn_...	Banana	mitochondrion	31.27	20.05
GSMUA_Achr1P22060_001	Banana	mitochondrion	28.96	19.23
GSMUA_Achr10P...	Banana	mitochondrion	31.66	18.72

Protein Annotations

EnsemblPlants:GSMUA_Achr2P17930_001	EnsemblPlants:GSMUA_Achr2T17930_001	EnsemblPlantsGene:GSMUA_Achr2G17930_001	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF9	SEG:seg	UniParc:UPI000296BD9B
UniProt:M0S8Y4	MapMan:16.12.5.1	:	:	:	:

Description

DAG protein, chloroplast precursor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G17930_001]

Coordinates

chr2:-:18388764..18394143

Molecular Weight (calculated)

29222.1 Da

IEP (calculated)

10.103

GRAVY (calculated)

-0.501

Length

259 amino acids

Sequence
(BLAST)

001: MIRASTLFLS QQDGFKRIEV VLIKIRLSRA RPLRSWPPMA VSAAVVSSPF LGSRSLITLT RSKRFLRLAS AGTPLVPIGA SRRCMVRRAG NSSYSPVTAG
101: SRGGSGFSDR PPTEMPPLFP GCDYEHWLIV MDKPGGEGAT KQQMIDCYIQ TLAKVVGSEE EAKRRIYNVS CERYFGFGCE IDEETSNKLE GLPGVLFVLP
201: DSYVDAENKD YGAELFVNGE IVQRSPERQR RVEPVPQRAQ DRPRYNDRTR YVRRRENRQ

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.