Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G027080.4 | |
| HORVU1Hr1G047110.10 | |
| HORVU5Hr1G093460.2 | |
| HORVU6Hr1G062870.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79529 | Canola | cytosol | 80.73 | 72.73 |
| Os06t0116600-01 | Rice | mitochondrion | 90.83 | 60.0 |
| GSMUA_Achr6P01260_001 | Banana | cytosol | 79.82 | 59.18 |
| GSMUA_Achr4P27580_001 | Banana | cytosol | 78.9 | 58.5 |
| Bra017613.1-P | Field mustard | plastid | 35.78 | 57.35 |
| CDY58181 | Canola | cytosol | 70.64 | 45.83 |
| Bra023005.1-P | Field mustard | endoplasmic reticulum | 38.53 | 45.16 |
| Bra017328.1-P | Field mustard | cytosol | 76.15 | 44.62 |
| TraesCS6D01G007100.1 | Wheat | mitochondrion | 97.25 | 43.98 |
| Zm00001d045528_P001 | Maize | mitochondrion | 89.91 | 43.95 |
| EER87743 | Sorghum | mitochondrion | 88.99 | 43.69 |
| HORVU7Hr1G008880.2 | Barley | plastid | 93.58 | 42.5 |
| TraesCS6B01G010000.1 | Wheat | plastid | 97.25 | 42.23 |
| HORVU6Hr1G002030.1 | Barley | plastid | 99.08 | 42.02 |
| TraesCS6A01G005300.1 | Wheat | plastid | 96.33 | 42.0 |
| KRH31686 | Soybean | mitochondrion | 84.4 | 41.26 |
| PGSC0003DMT400038117 | Potato | plastid | 87.16 | 41.13 |
| CDY37719 | Canola | plastid | 83.49 | 40.99 |
| Bra021852.1-P | Field mustard | plastid | 83.49 | 40.99 |
| CDY23734 | Canola | plastid | 84.4 | 40.35 |
| VIT_05s0049g01500.t01 | Wine grape | plastid | 86.24 | 40.34 |
| KRG92352 | Soybean | mitochondrion, plastid | 87.16 | 40.08 |
| CDY17174 | Canola | plastid | 84.4 | 40.0 |
| Bra005495.1-P | Field mustard | plastid | 84.4 | 40.0 |
| CDY19491 | Canola | plastid | 84.4 | 39.83 |
| Solyc06g008220.2.1 | Tomato | plastid | 87.16 | 39.75 |
| VIT_07s0005g03930.t01 | Wine grape | mitochondrion, plastid | 82.57 | 38.14 |
| GSMUA_Achr2P17930_001 | Banana | mitochondrion, plastid | 88.07 | 37.07 |
| CDY65831 | Canola | mitochondrion, plastid | 75.23 | 36.77 |
| Bra036402.1-P | Field mustard | mitochondrion, plastid | 75.23 | 36.77 |
| CDX84224 | Canola | mitochondrion, plastid | 77.06 | 36.52 |
| PGSC0003DMT400060429 | Potato | plastid | 77.98 | 36.32 |
| KRH34443 | Soybean | plastid | 87.16 | 35.98 |
| Solyc05g054960.2.1 | Tomato | plastid | 77.06 | 35.9 |
| CDY31675 | Canola | plastid | 77.06 | 35.9 |
| Bra005357.1-P | Field mustard | plastid | 77.06 | 35.9 |
| AT1G32580.1 | Thale cress | mitochondrion, plastid | 75.23 | 35.81 |
| AT2G35240.1 | Thale cress | mitochondrion, plastid | 75.23 | 35.34 |
| HORVU5Hr1G072150.9 | Barley | mitochondrion | 54.13 | 34.3 |
| CDX79597 | Canola | plastid | 63.3 | 29.61 |
| CDX84615 | Canola | mitochondrion | 38.53 | 23.46 |
| HORVU2Hr1G040170.17 | Barley | mitochondrion | 55.05 | 21.98 |
| HORVU1Hr1G057120.1 | Barley | plastid | 27.52 | 19.61 |
| HORVU6Hr1G077460.3 | Barley | plastid | 46.79 | 19.25 |
| HORVU7Hr1G073170.2 | Barley | plastid | 36.7 | 15.81 |
| HORVU5Hr1G077020.3 | Barley | mitochondrion | 45.87 | 12.29 |
| HORVU7Hr1G054850.2 | Barley | plastid | 47.71 | 12.01 |
| HORVU4Hr1G016440.1 | Barley | mitochondrion, plastid | 36.7 | 9.3 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G032330.2 | EnsemblPlantsGene:HORVU0Hr1G032330 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016554 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF9 | SEG:seg | UniParc:UPI000B46D15C | UniProt:A0A287EAY0 |
| MapMan:16.12.5.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchrUn:-:192571513..192573640
Molecular Weight (calculated)
12940.1 Da
IEP (calculated)
7.187
GRAVY (calculated)
-1.255
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MCRSEEEAKK KIYNVSCERY FGFGCEIDEE TSNKLEGIPG VLFVLPDSYV DPEHKDYGAE LFVNGEIVQR SPERQRRVEP VPQRASDRPR YNDRTRYARR
101: RENQQQPQR
101: RENQQQPQR
001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR
Arabidopsis Description
MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.