CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91356
KRH13399
KRH16959
KRH20755
KRH24006
KRH24392
KRH27971
KRH29310
KRH29374
KRH31661
KRH35470
KRH51475
KRH53667
KRH60786
KRH62918
KRH64261
KRH69115
KRH77487

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32580.1	KRH24006	AT3G48150.1	21798944
AT1G32580.1	KRH27971	AT3G48150.1	21798944
AT1G32580.1	KRH29310	AT3G48150.1	21798944
AT1G32580.1	KRH77487	AT3G48150.1	21798944
AT1G32580.1	KRH16959	AT3G49580.1	21798944
AT1G32580.1	KRH53667	AT3G49580.1	21798944
AT1G32580.1	KRH64261	AT3G49580.1	21798944
AT2G35240.1	KRH16959	AT3G49580.1	21798944
AT2G35240.1	KRH53667	AT3G49580.1	21798944
AT2G35240.1	KRH64261	AT3G49580.1	21798944
AT2G35240.1	KRG91356	AT4G14740.1	21798944
AT2G35240.1	KRH31661	AT4G14740.1	21798944
AT2G35240.1	KRH35470	AT4G14740.1	21798944
AT2G35240.1	KRH69115	AT4G14740.1	21798944
AT2G35240.1	KRH24392	AT4G39050.1	21798944
AT2G35240.1	KRH29374	AT4G39050.1	21798944
AT2G35240.1	KRH51475	AT4G39050.1	21798944
AT2G35240.1	KRH60786	AT4G39050.1	21798944
AT2G35240.1	KRH13399	AT5G13810.1	21798944
AT2G35240.1	KRH20755	AT5G13810.1	21798944
AT2G35240.1	KRH62918	AT5G13810.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P01260_001	Banana	cytosol	56.5	85.71
HORVU0Hr1G032330.2	Barley	cytosol	41.26	84.4
Os06t0116600-01	Rice	mitochondrion	62.33	84.24
CDX79529	Canola	cytosol	45.29	83.47
GSMUA_Achr4P27580_001	Banana	cytosol	54.71	82.99
Zm00001d026243_P002	Maize	extracellular	67.71	69.59
EES11377	Sorghum	mitochondrion, plastid	66.82	68.98
CDY37719	Canola	plastid	68.61	68.92
Bra021852.1-P	Field mustard	plastid	68.16	68.47
TraesCS2D01G434600.1	Wheat	plastid	65.92	68.37
CDY23734	Canola	plastid	69.51	67.98
TraesCS2A01G437600.1	Wheat	plastid	64.57	67.29
CDY19491	Canola	plastid	69.51	67.1
KRG92352	Soybean	mitochondrion, plastid	71.3	67.09
CDY17174	Canola	plastid	69.06	66.96
Bra005495.1-P	Field mustard	plastid	69.06	66.96
TraesCS2B01G457700.1	Wheat	plastid	64.13	66.82
PGSC0003DMT400038117	Potato	plastid	69.06	66.67
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	70.4	66.53
EER87743	Sorghum	mitochondrion	65.92	66.22
Zm00001d045528_P001	Maize	mitochondrion	65.47	65.47
Solyc06g008220.2.1	Tomato	plastid	69.51	64.85
TraesCS7D01G045100.1	Wheat	mitochondrion, plastid	66.37	63.79
TraesCS4A01G437100.1	Wheat	mitochondrion	66.82	63.4
TraesCS7A01G050200.1	Wheat	mitochondrion	66.37	62.71
HORVU7Hr1G008880.2	Barley	plastid	66.82	62.08
KRH34443	Soybean	plastid	71.75	60.61
TraesCS6D01G007100.1	Wheat	mitochondrion	65.47	60.58
AT1G32580.1	Thale cress	mitochondrion, plastid	61.44	59.83
AT2G35240.1	Thale cress	mitochondrion, plastid	61.88	59.48
TraesCS6B01G010000.1	Wheat	plastid	66.37	58.96
TraesCS6A01G005300.1	Wheat	plastid	65.47	58.4
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	67.71	58.3
HORVU5Hr1G072150.9	Barley	mitochondrion	44.84	58.14
HORVU6Hr1G002030.1	Barley	plastid	66.37	57.59
HORVU1Hr1G057120.1	Barley	plastid	31.84	46.41
TraesCS3A01G476100.2	Wheat	plastid	33.63	42.13
HORVU2Hr1G040170.17	Barley	mitochondrion	43.5	35.53
KRH02286	Soybean	mitochondrion	36.77	33.2
KRH50805	Soybean	mitochondrion	36.77	32.93
KRH21628	Soybean	nucleus, plastid	30.94	30.67
KRH10700	Soybean	nucleus, plastid	30.49	30.63
KRH27318	Soybean	nucleus	39.91	24.52
KRH21995	Soybean	plastid	39.01	21.7
KRH26355	Soybean	mitochondrion	30.94	14.94
KRH44085	Soybean	mitochondrion, plastid	30.49	14.72

Protein Annotations

EMBL:ACUP02006076	EnsemblPlants:KRH31686	EnsemblPlantsGene:GLYMA_10G005100	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF9	ProteinID:KRH31686	ProteinID:KRH31686.1
SEG:seg	UniParc:UPI00023C88CC	UniProt:I1L7G0	MapMan:16.12.5.1	:	:

Description

hypothetical protein

Coordinates

chr10:-:520851..523612

Molecular Weight (calculated)

25349.4 Da

IEP (calculated)

9.168

GRAVY (calculated)

-0.623

Length

223 amino acids

Sequence
(BLAST)

001: MARRLLPLTS LRHLSIAASR RLLSSALPVA PRPYPPLTAR FAVVRCLCNR PGDSAYSPLN TGKPTSILSS ITERPPTDMA PLFPGCDYHH WLVVIHKPGG
101: EGATKQQMID CYVQTLAKVL GSEEEAKKKI YNVSCERYFA FGCDIDEETS NKLEGLPGVL FVLPDSYVDP EHKDYGGELF VNGEIVQRPP ERQRRVEPQP
201: QRQQDRPRYN DRTRYVRRRE NTK

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.