Factsheet for TraesCS3A01G476100.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
cytosol 1
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G177600.1
TraesCS1B01G202600.1
TraesCS1D01G176100.1
TraesCS5A01G056700.2
TraesCS5A01G377600.1
TraesCS5B01G060100.2
TraesCS5B01G381200.1
TraesCS5D01G067900.2
TraesCS5D01G387600.1
TraesCS6A01G251400.1
TraesCS6B01G273900.1
TraesCS6D01G233200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32580.1	TraesCS6A01G251400.1	AT3G48150.1	21798944
AT1G32580.1	TraesCS6B01G273900.1	AT3G48150.1	21798944
AT1G32580.1	TraesCS6D01G233200.1	AT3G48150.1	21798944
AT2G35240.1	TraesCS5A01G056700.2	AT4G14740.1	21798944
AT2G35240.1	TraesCS5A01G377600.1	AT4G14740.1	21798944
AT2G35240.1	TraesCS5B01G060100.2	AT4G14740.1	21798944
AT2G35240.1	TraesCS5B01G381200.1	AT4G14740.1	21798944
AT2G35240.1	TraesCS5D01G067900.2	AT4G14740.1	21798944
AT2G35240.1	TraesCS5D01G387600.1	AT4G14740.1	21798944
AT2G35240.1	TraesCS1A01G177600.1	AT4G39050.1	21798944
AT2G35240.1	TraesCS1B01G202600.1	AT4G39050.1	21798944
AT2G35240.1	TraesCS1D01G176100.1	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0116600-01	Rice	mitochondrion	44.94	48.48
GSMUA_Achr6P01260_001	Banana	cytosol	37.08	44.9
GSMUA_Achr4P27580_001	Banana	cytosol	35.96	43.54
HORVU5Hr1G072150.9	Barley	mitochondrion	40.45	41.86
EER87743	Sorghum	mitochondrion	51.69	41.44
Zm00001d045528_P001	Maize	mitochondrion	51.69	41.26
TraesCS7A01G050200.1	Wheat	mitochondrion	53.37	40.25
TraesCS4A01G437100.1	Wheat	mitochondrion	52.81	40.0
CDY58181	Canola	cytosol	37.64	39.88
Bra017328.1-P	Field mustard	cytosol	41.57	39.78
TraesCS2A01G437600.1	Wheat	plastid	47.75	39.72
TraesCS6A01G005300.1	Wheat	plastid	52.81	37.6
Bra036402.1-P	Field mustard	mitochondrion, plastid	44.94	35.87
CDY65831	Canola	mitochondrion, plastid	44.94	35.87
VIT_05s0049g01500.t01	Wine grape	plastid	46.63	35.62
CDY23734	Canola	plastid	45.51	35.53
KRG92352	Soybean	mitochondrion, plastid	47.19	35.44
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	46.63	35.17
CDY37719	Canola	plastid	43.82	35.14
Bra021852.1-P	Field mustard	plastid	43.82	35.14
Solyc05g054960.2.1	Tomato	plastid	46.07	35.04
PGSC0003DMT400060429	Potato	plastid	46.07	35.04
PGSC0003DMT400038117	Potato	plastid	44.94	34.63
AT1G32580.1	Thale cress	mitochondrion, plastid	44.38	34.5
CDX84224	Canola	mitochondrion, plastid	44.38	34.35
Bra005357.1-P	Field mustard	plastid	44.94	34.19
CDY31675	Canola	plastid	44.94	34.19
Solyc06g008220.2.1	Tomato	plastid	45.51	33.89
KRH31686	Soybean	mitochondrion	42.13	33.63
CDX79529	Canola	cytosol	22.47	33.06
Bra005495.1-P	Field mustard	plastid	42.7	33.04
CDY17174	Canola	plastid	42.13	32.61
CDY19491	Canola	plastid	42.13	32.47
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	47.19	32.43
AT2G35240.1	Thale cress	mitochondrion, plastid	42.13	32.33
KRH34443	Soybean	plastid	47.19	31.82
CDX79597	Canola	plastid	39.89	30.47
HORVU2Hr1G040170.17	Barley	mitochondrion	39.33	25.64
TraesCS7A01G307000.1	Wheat	plastid	27.53	21.59
TraesCS6A01G314700.1	Wheat	mitochondrion	26.97	19.05
CDX84615	Canola	mitochondrion	16.29	16.2
Bra017613.1-P	Field mustard	plastid	5.62	14.71
TraesCS5A01G291000.1	Wheat	mitochondrion	26.97	12.06
TraesCS4A01G203900.1	Wheat	nucleus	26.97	11.59
TraesCS7A01G262500.1	Wheat	mitochondrion	25.28	10.82
Bra023005.1-P	Field mustard	endoplasmic reticulum	5.62	10.75

Protein Annotations

EnsemblPlants:TraesCS3A01G476100.2

EnsemblPlantsGene:TraesCS3A01G476100

PANTHER:PTHR31346

PANTHER:PTHR31346:SF9

SEG:seg

MapMan:35.1

Description

No Description!

Coordinates

chr3A:-:707465127..707465946

Molecular Weight (calculated)

19681.8 Da

IEP (calculated)

8.967

GRAVY (calculated)

-0.476

Length

178 amino acids

Sequence
(BLAST)

001: MAAAATSMAR RCSPLPPHLP PPRLPRVHPA HPGVDEGDAA PRGRRLLVAP LPRRQGRQGH GAAAGGRRVL PHAGRRRGRD RAPTEMAPLF PGCDYEHWLI
101: VMDNLGGEGD SKHQMIDCYI HTLAKVLGSS KEEAKRKIYN VSCQRYFGFG CEIDEETAIK LECFRVIHMD SWCSLCAP

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.