CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50805	Soybean	mitochondrion	91.5	90.76
Bra001218.1-P	Field mustard	cytosol	40.89	71.63
CDX74079	Canola	cytosol	41.7	70.07
CDY34929	Canola	cytosol	39.68	70.0
CDY08033	Canola	mitochondrion	59.11	67.91
VIT_05s0077g01880.t01	Wine grape	mitochondrion	70.04	66.54
Os03t0581600-01	Rice	mitochondrion	60.32	65.35
Bra040292.1-P	Field mustard	mitochondrion, plastid	64.78	64.78
AT3G06790.2	Thale cress	mitochondrion	63.56	64.34
GSMUA_Achr11P...	Banana	mitochondrion	64.37	62.85
PGSC0003DMT400043314	Potato	mitochondrion, plastid	65.99	62.69
Solyc01g066060.2.1	Tomato	plastid	65.59	62.55
EES12861	Sorghum	mitochondrion	61.54	62.3
Zm00001d026307_P001	Maize	mitochondrion	61.13	61.38
GSMUA_Achr8P22480_001	Banana	mitochondrion	63.16	60.23
TraesCS6B01G344700.2	Wheat	mitochondrion	60.73	59.29
TraesCS6A01G314700.1	Wheat	mitochondrion	60.32	59.13
TraesCS6D01G294000.1	Wheat	mitochondrion	60.32	59.13
HORVU6Hr1G077460.3	Barley	plastid	60.32	56.23
KRG92352	Soybean	mitochondrion, plastid	37.25	38.82
KRH31686	Soybean	mitochondrion	33.2	36.77
KRH21628	Soybean	nucleus, plastid	32.39	35.56
KRH10700	Soybean	nucleus, plastid	31.58	35.14
KRH34443	Soybean	plastid	36.44	34.09
KRH27318	Soybean	nucleus	42.11	28.65
KRH21995	Soybean	plastid	44.13	27.18
KRH26355	Soybean	mitochondrion	33.2	17.75
KRH44085	Soybean	mitochondrion, plastid	32.39	17.32

Protein Annotations

EMBL:ACUP02010302	EnsemblPlants:KRH02286	EnsemblPlantsGene:GLYMA_17G028800	EntrezGene:100803571	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF1	ProteinID:KRH02286
ProteinID:KRH02286.1	SEG:seg	UniParc:UPI000233E96B	UniProt:I1MRL1	MapMan:16.12.5.1	:

Description

hypothetical protein

Coordinates

chr17:+:2137025..2138558

Molecular Weight (calculated)

27714.5 Da

IEP (calculated)

9.159

GRAVY (calculated)

-0.733

Length

247 amino acids

Sequence
(BLAST)

001: MAYLNARRTL AYRLAGALSS SSASASRCRF ALALHHAKQT VPIPHPASFA VRTQSSGSGY SPLNDPSPNW SNRPPKETIL LDGCDYEHWL IVMEFPDNPK
101: PSEDHMVNSY VKTLAQVLGS EEEAKKKIYS VSTSTYTGFG ALISEELSYK VKELPGVLWV LPDSYLDVPN KDYGGDLFVD GKVIPRPQYR YSDRQPSRSR
201: PRPRHDRQRQ TMQVERRDQQ NWNQGPGGSM QPSTAMNSQN FVSGGEY

Best Arabidopsis Sequence Match ( AT3G06790.2 )
(BLAST)

001: MALISTRRTL STLLNKTLSS STSYSSSFPT LSSRSRFAMP LIEKVSSSRT SLGPCYISTR PKTSGSGYSP LNDPSPNWSN RPPKETILLD GCDYEHWLIV
101: MEFTDPKPTE EEMINSYVKT LTSVLGCEEE AKKKIYSVCT STYTGFGALI SEELSCKVKA LPGVLWVLPD SYLDVPNKDY GGDLYVEGKV IPRPQYRFTE
201: QRHTRPRPRP RYDRRRETMQ VERREPSMGL HSPVNPGEFN KPSA

Arabidopsis Description

MORF3Multiple organellar RNA editing factor 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.