Factsheet for Zm00001d026307_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

extracellular: 20408568
mitochondrion: 27297264
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12861	Sorghum	mitochondrion	91.06	91.8
Os03t0581600-01	Rice	mitochondrion	78.86	85.09
TraesCS6D01G294000.1	Wheat	mitochondrion	79.27	77.38
TraesCS6A01G314700.1	Wheat	mitochondrion	78.46	76.59
TraesCS6B01G344700.2	Wheat	mitochondrion	78.05	75.89
HORVU6Hr1G077460.3	Barley	plastid	78.46	72.83
CDY34929	Canola	cytosol	40.65	71.43
Bra001218.1-P	Field mustard	cytosol	40.24	70.21
GSMUA_Achr8P22480_001	Banana	mitochondrion	71.95	68.34
CDX74079	Canola	cytosol	40.65	68.03
GSMUA_Achr11P...	Banana	mitochondrion	66.26	64.43
VIT_05s0077g01880.t01	Wine grape	mitochondrion	67.07	63.46
CDY08033	Canola	mitochondrion	55.28	63.26
AT3G06790.2	Thale cress	mitochondrion	62.6	63.11
Solyc01g066060.2.1	Tomato	plastid	65.85	62.55
PGSC0003DMT400043314	Potato	mitochondrion, plastid	65.85	62.31
KRH50805	Soybean	mitochondrion	63.01	62.25
KRH02286	Soybean	mitochondrion	61.38	61.13
Bra040292.1-P	Field mustard	mitochondrion, plastid	61.38	61.13
Zm00001d026243_P002	Maize	extracellular	33.74	38.25
Zm00001d024674_P001	Maize	plastid	33.33	36.77
Zm00001d045528_P001	Maize	mitochondrion	33.33	36.77
Zm00001d048291_P001	Maize	mitochondrion	46.34	27.8
Zm00001d049043_P001	Maize	mitochondrion	30.89	18.54

Protein Annotations

MapMan:16.12.5.1	ProteinID:AQK46210.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	GO:GO:0050897	GO:GO:0080156	GO:GO:1900864	UniProt:K7TSG0
PANTHER:PTHR31346	PANTHER:PTHR31346:SF1	UniParc:UPI000221A426	EnsemblPlantsGene:Zm00001d026307	EnsemblPlants:Zm00001d026307_P001	EnsemblPlants:Zm00001d026307_T001
SEG:seg	:	:	:	:	:

Description

DAG protein

Coordinates

chr10:-:143304025..143307489

Molecular Weight (calculated)

27272.3 Da

IEP (calculated)

9.341

GRAVY (calculated)

-0.642

Length

246 amino acids

Sequence
(BLAST)

001: MAAASATRRG LSSLLLSPSS RALRRRLGPL AAAAASPHVA PWPLLAPRGA RTASSGGSGH SPLNDPSPNW SNRPPKETIL LDGCDYEHWL IVMEFPTDPK
101: PSEEEMVAAY VKTLAAVLGS EEEAKKKIYS VCTSTYTGFG ALISEELSYK VKGLPGVLWV LPDSYLDVPN KDYGGDLFVD GKVIHRPQFR FNERQQVRSR
201: PRPRYDRRRE IAQVEPRETM QRGPSTTQQQ RPPCPQEAAT QNQEQH

Best Arabidopsis Sequence Match ( AT3G06790.2 )
(BLAST)

001: MALISTRRTL STLLNKTLSS STSYSSSFPT LSSRSRFAMP LIEKVSSSRT SLGPCYISTR PKTSGSGYSP LNDPSPNWSN RPPKETILLD GCDYEHWLIV
101: MEFTDPKPTE EEMINSYVKT LTSVLGCEEE AKKKIYSVCT STYTGFGALI SEELSCKVKA LPGVLWVLPD SYLDVPNKDY GGDLYVEGKV IPRPQYRFTE
201: QRHTRPRPRP RYDRRRETMQ VERREPSMGL HSPVNPGEFN KPSA

Arabidopsis Description

MORF3Multiple organellar RNA editing factor 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.