Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97960 | Canola | cytosol | 81.68 | 69.48 |
| CDY20996 | Canola | cytosol | 78.63 | 67.32 |
| GSMUA_Achr8P33150_001 | Banana | cytosol | 67.94 | 64.03 |
| CDY49781 | Canola | plastid | 81.68 | 44.58 |
| AT1G11430.1 | Thale cress | plastid | 77.86 | 43.97 |
| EES14516 | Sorghum | plastid | 71.76 | 41.78 |
| Zm00001d024674_P001 | Maize | plastid | 70.99 | 41.7 |
| TraesCS7A01G307000.1 | Wheat | plastid | 71.76 | 41.41 |
| TraesCS7B01G207300.1 | Wheat | plastid | 71.76 | 41.23 |
| TraesCS7D01G303900.1 | Wheat | plastid | 70.99 | 40.79 |
| VIT_19s0014g04710.t01 | Wine grape | plastid | 70.99 | 40.61 |
| Os08t0139100-01 | Rice | plastid | 70.99 | 40.61 |
| KRH10700 | Soybean | nucleus, plastid | 68.7 | 40.54 |
| KRH21628 | Soybean | nucleus, plastid | 68.7 | 40.0 |
| Bra019853.1-P | Field mustard | plastid | 81.68 | 39.78 |
| CDY57037 | Canola | mitochondrion | 77.86 | 39.38 |
| PGSC0003DMT400055883 | Potato | plastid | 67.94 | 39.38 |
| Solyc02g079770.2.1 | Tomato | plastid | 67.18 | 38.94 |
| HORVU7Hr1G073170.2 | Barley | plastid | 70.99 | 36.76 |
| CDY34929 | Canola | cytosol | 35.11 | 32.86 |
| CDX74079 | Canola | cytosol | 36.64 | 32.65 |
| CDX79529 | Canola | cytosol | 29.77 | 32.23 |
| CDY58181 | Canola | cytosol | 29.01 | 22.62 |
| CDY08033 | Canola | mitochondrion | 35.88 | 21.86 |
| CDY37719 | Canola | plastid | 31.3 | 18.47 |
| CDY23734 | Canola | plastid | 31.3 | 17.98 |
| CDY17174 | Canola | plastid | 31.3 | 17.83 |
| CDY19491 | Canola | plastid | 31.3 | 17.75 |
| CDY65831 | Canola | mitochondrion, plastid | 29.01 | 17.04 |
| CDX84224 | Canola | mitochondrion, plastid | 29.01 | 16.52 |
| CDX79597 | Canola | plastid | 29.01 | 16.31 |
| CDY31675 | Canola | plastid | 29.01 | 16.24 |
| CDX72924 | Canola | mitochondrion | 21.37 | 15.3 |
| CDX68262 | Canola | mitochondrion | 22.14 | 15.26 |
| CDY65020 | Canola | mitochondrion | 22.14 | 15.26 |
| CDX96416 | Canola | mitochondrion | 22.14 | 15.26 |
| CDX98651 | Canola | mitochondrion | 35.88 | 14.55 |
| CDY01629 | Canola | mitochondrion | 42.75 | 14.25 |
| CDY50054 | Canola | mitochondrion | 40.46 | 13.95 |
| CDX78969 | Canola | mitochondrion | 40.46 | 13.84 |
| CDY20096 | Canola | plastid | 27.48 | 11.46 |
| CDX97626 | Canola | plastid | 30.53 | 10.99 |
| CDX82454 | Canola | mitochondrion, plastid | 32.06 | 10.8 |
| CDX98522 | Canola | plastid | 30.53 | 10.78 |
| CDX75801 | Canola | mitochondrion, plastid | 32.82 | 10.78 |
| CDX84615 | Canola | mitochondrion | 14.5 | 10.61 |
| CDY32326 | Canola | cytosol | 25.19 | 9.35 |
| CDY60655 | Canola | plastid | 35.88 | 6.51 |
Protein Annotations
| EnsemblPlants:CDY37239 | EnsemblPlantsGene:GSBRNA2T00063727001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016554 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF3 | ProteinID:CDY37239 | ProteinID:CDY37239.1 | SEG:seg |
| UniParc:UPI0004EEBC2A | UniProt:A0A078HIR3 | MapMan:16.12.5.1 | : | : | : |
Description
BnaA09g08600DBnaA09g08600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIR3]
Coordinates
chrLK032395:-:334647..335329
Molecular Weight (calculated)
14947.8 Da
IEP (calculated)
9.438
GRAVY (calculated)
-0.892
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAKKNMYA FSTTTYTGFQ CTIDEETSEK FKGLPGVLWV LPDSYIDVKN KDYGGDKYIN GEIIPCTYPT YQPKQRNNSK YQSKRYERKR DGPPPPEQQR
101: KPRQAPPPAS VSVMVSYKTG LLVLVTAREI G
101: KPRQAPPPAS VSVMVSYKTG LLVLVTAREI G
001: MASFTTTSSS SLLLKTLLPV SHLNRFSTLS GIRVGDSWTP LLRNISTAGS RRRVAIVKAA TVDSDYSSKR SNSNEQRETI MLPGCDYNHW LIVMEFPKDP
101: APSRDQMIDT YLNTLATVLG SMEEAKKNMY AFSTTTYTGF QCTIDEETSE KFKGLPGVLW VLPDSYIDVK NKDYGGDKYI NGEIIPCTYP TYQPKQRNNT
201: KYQSKRYERK RDGPPPPEQR KPRQEPAASD SS
101: APSRDQMIDT YLNTLATVLG SMEEAKKNMY AFSTTTYTGF QCTIDEETSE KFKGLPGVLW VLPDSYIDVK NKDYGGDKYI NGEIIPCTYP TYQPKQRNNT
201: KYQSKRYERK RDGPPPPEQR KPRQEPAASD SS
Arabidopsis Description
MORF9Multiple organellar RNA editing factor 9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LPZ1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.