Factsheet for AT2G30580.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022807.1-P	Field mustard	cytosol	14.29	85.71
CDY47131	Canola	nucleus	82.86	83.45
CDY10748	Canola	nucleus	83.33	83.14
Bra018304.1-P	Field mustard	nucleus	82.62	80.32
CDX97807	Canola	nucleus	76.19	76.92
CDY29659	Canola	nucleus	76.43	76.25
CDY23989	Canola	nucleus	75.48	73.89
Bra021651.1-P	Field mustard	nucleus	60.71	72.44
AT1G06770.1	Thale cress	nucleus	67.86	67.7
VIT_07s0141g00610.t01	Wine grape	nucleus	56.9	55.58
KRG95629	Soybean	nucleus	55.0	53.97
PGSC0003DMT400038984	Potato	nucleus	54.76	53.49
KRH67309	Soybean	nucleus	56.43	53.26
Solyc09g065990.2.1	Tomato	nucleus	53.33	52.09
Solyc06g084040.2.1	Tomato	nucleus	53.1	51.74
Solyc06g008600.2.1	Tomato	nucleus	50.0	50.24
KRH71326	Soybean	mitochondrion, nucleus	50.95	49.65
KRH32110	Soybean	nucleus	50.48	49.42
GSMUA_Achr9P10710_001	Banana	nucleus	46.43	48.99
PGSC0003DMT400051660	Potato	nucleus	52.62	48.89
Os03t0741700-00	Rice	cytosol	20.48	44.79
PGSC0003DMT400013629	Potato	nucleus	30.71	44.03
GSMUA_Achr5P03230_001	Banana	nucleus	45.0	42.95
GSMUA_Achr4P17750_001	Banana	nucleus	39.29	42.42
Os12t0600200-03	Rice	cytosol, nucleus	31.67	38.66
TraesCS5A01G381800.1	Wheat	mitochondrion	33.81	37.87
TraesCS5D01G391100.1	Wheat	mitochondrion	33.81	37.87
TraesCS5B01G382100.1	Wheat	nucleus	45.95	37.4
TraesCS5A01G378600.1	Wheat	nucleus	45.24	37.4
TraesCS5D01G388500.1	Wheat	nucleus	46.19	37.31
HORVU5Hr1G093720.3	Barley	nucleus	45.95	37.04
Zm00001d041405_P001	Maize	nucleus	42.86	37.04
KXG37982	Sorghum	nucleus	45.0	36.63
Zm00001d030985_P001	Maize	nucleus	41.43	36.55
TraesCS5B01G385300.1	Wheat	mitochondrion	34.05	35.75
Zm00001d033322_P001	Maize	nucleus	44.76	35.74
TraesCS5A01G058000.1	Wheat	nucleus	39.76	35.38
TraesCS5D01G069800.1	Wheat	nucleus	39.76	35.38
HORVU5Hr1G014430.6	Barley	nucleus	39.29	34.81
TraesCS5B01G065600.1	Wheat	cytosol	39.05	34.75
Os03t0632800-01	Rice	nucleus	35.71	34.72
HORVU5Hr1G094160.2	Barley	plastid	34.29	32.51
OQU79520	Sorghum	nucleus	41.9	31.88
Zm00001d013303_P001	Maize	nucleus	29.05	31.36
KXG37592	Sorghum	mitochondrion, nucleus	35.95	30.94
Zm00001d033967_P001	Maize	nucleus	27.62	30.37
AT3G23060.1	Thale cress	nucleus	30.0	26.25

Protein Annotations

MapMan:12.3.5.1.1.1	Gene3D:3.30.40.10	EntrezGene:817608	UniProt:A0A178VRI3	ProteinID:AAB63079.2	ProteinID:AEC08411.1
ProteinID:ANM61597.1	ArrayExpress:AT2G30580	EnsemblPlantsGene:AT2G30580	RefSeq:AT2G30580	TAIR:AT2G30580	RefSeq:AT2G30580-TAIR-G
EnsemblPlants:AT2G30580.1	TAIR:AT2G30580.1	EMBL:AY045618	Unigene:At.14726	EMBL:BT000505	Symbol:DRIP2
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009414	GO:GO:0009628	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0046872	GO:GO:0051865	InterPro:IPR001841
InterPro:IPR013083	RefSeq:NP_001323803.1	RefSeq:NP_565702.1	ProteinID:OAP09097.1	PFAM:PF13923	PO:PO:0000013
PO:PO:0000014	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016
PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00518	PFscan:PS50089
PANTHER:PTHR10825	PANTHER:PTHR10825:SF70	UniProt:Q94AY3	SMART:SM00184	SUPFAM:SSF57850	UniParc:UPI00000AC582
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	SEG:seg	:	:

Description

DRIP2DRIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VRI3]

Coordinates

chr2:+:13025911..13030661

Molecular Weight (calculated)

47192.4 Da

IEP (calculated)

9.811

GRAVY (calculated)

-0.701

Length

420 amino acids

Sequence
(BLAST)

001: MEGDMVAKVK RETVVACMTC PLCDKLLRDA TTISECLHTF CRKCIYEKIT EDEIESCPVC DIDLGGTPLE KLRPDHILQD LRAKLFPLKR KKERAPEVVS
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIRDGN IPVSFIQKYL MRKLDLKSED EVEITCMGEP VIPTLQLHSL VDLWLETTSK HQRVAASIGS
401: SAKEFVMVLV YSRKLPECNN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.