Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra005852.1-P | |
| Bra009112.1-P | |
| Bra028759.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G06770.1 | Bra005852.1-P | AT5G05410.1 | 18552202 |
| AT1G06770.1 | Bra009112.1-P | AT5G05410.1 | 18552202 |
| AT1G06770.1 | Bra028759.1-P | AT5G05410.1 | 18552202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015526.1-P | Field mustard | nucleus | 49.88 | 85.31 |
| CDY06664 | Canola | nucleus | 72.31 | 79.11 |
| Bra022807.1-P | Field mustard | cytosol | 8.35 | 50.0 |
| AT1G06770.1 | Thale cress | nucleus | 39.86 | 39.67 |
| Bra021651.1-P | Field mustard | nucleus | 29.59 | 35.23 |
| Bra018304.1-P | Field mustard | nucleus | 36.04 | 34.95 |
| VIT_07s0141g00610.t01 | Wine grape | nucleus | 34.13 | 33.26 |
| GSMUA_Achr9P10710_001 | Banana | nucleus | 31.5 | 33.17 |
| Solyc06g008600.2.1 | Tomato | nucleus | 32.46 | 32.54 |
| KRH67309 | Soybean | nucleus | 34.37 | 32.36 |
| PGSC0003DMT400038984 | Potato | nucleus | 33.17 | 32.33 |
| KRG95629 | Soybean | nucleus | 32.94 | 32.24 |
| Solyc09g065990.2.1 | Tomato | nucleus | 32.7 | 31.86 |
| Os03t0741700-00 | Rice | cytosol | 14.32 | 31.25 |
| Solyc06g084040.2.1 | Tomato | nucleus | 31.26 | 30.39 |
| GSMUA_Achr5P03230_001 | Banana | nucleus | 31.5 | 30.0 |
| GSMUA_Achr4P17750_001 | Banana | nucleus | 27.45 | 29.56 |
| KRH71326 | Soybean | mitochondrion, nucleus | 30.07 | 29.23 |
| PGSC0003DMT400051660 | Potato | nucleus | 31.5 | 29.2 |
| KRH32110 | Soybean | nucleus | 29.59 | 28.9 |
| Os12t0600200-03 | Rice | cytosol, nucleus | 23.39 | 28.49 |
| PGSC0003DMT400013629 | Potato | nucleus | 19.33 | 27.65 |
| TraesCS5D01G388500.1 | Wheat | nucleus | 32.46 | 26.15 |
| TraesCS5A01G378600.1 | Wheat | nucleus | 31.5 | 25.98 |
| HORVU5Hr1G014430.6 | Barley | nucleus | 29.12 | 25.74 |
| Zm00001d030985_P001 | Maize | nucleus | 29.12 | 25.63 |
| TraesCS5B01G382100.1 | Wheat | nucleus | 31.26 | 25.39 |
| HORVU5Hr1G093720.3 | Barley | nucleus | 31.5 | 25.34 |
| TraesCS5A01G058000.1 | Wheat | nucleus | 28.16 | 25.0 |
| TraesCS5D01G069800.1 | Wheat | nucleus | 27.92 | 24.79 |
| TraesCS5D01G391100.1 | Wheat | mitochondrion | 21.72 | 24.27 |
| TraesCS5A01G381800.1 | Wheat | mitochondrion | 21.72 | 24.27 |
| KXG37982 | Sorghum | nucleus | 29.83 | 24.22 |
| Zm00001d041405_P001 | Maize | nucleus | 27.92 | 24.07 |
| TraesCS5B01G065600.1 | Wheat | cytosol | 26.97 | 23.94 |
| TraesCS5B01G385300.1 | Wheat | mitochondrion | 22.2 | 23.25 |
| Zm00001d033322_P001 | Maize | nucleus | 28.88 | 23.0 |
| OQU79520 | Sorghum | nucleus | 28.64 | 21.74 |
| HORVU5Hr1G094160.2 | Barley | plastid | 22.67 | 21.44 |
| Os03t0632800-01 | Rice | nucleus | 21.48 | 20.83 |
| Zm00001d033967_P001 | Maize | nucleus | 18.14 | 19.9 |
| KXG37592 | Sorghum | mitochondrion, nucleus | 22.2 | 19.06 |
| Zm00001d013303_P001 | Maize | nucleus | 17.18 | 18.51 |
| Bra001901.1-P | Field mustard | nucleus | 17.66 | 15.98 |
Protein Annotations
Description
AT1G06770 (E=2e-037) DRIP1 | DRIP1 (DREB2A-INTERACTING PROTEIN 1); protein binding / ubiquitin-protein ligase/ zinc ion binding
Coordinates
chrA10:+:1250969..1255814
Molecular Weight (calculated)
47170.2 Da
IEP (calculated)
9.691
GRAVY (calculated)
-0.759
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCSNSRNTV DEHGNGPMLH TTGQKPHAGV RLEMTVPETQ YTQRVFGSPS SRGPSVPPPP MTMRQQNPIP GESTSDTHAE ADVMRSLRFY LVLEEIVVGG
101: GGSGGIIHFH WSDIPTGDVY HHIVNVKGRV YVRKCIYEKI TEDEIECCPV CNIDLGGTPL DKLRPDHNLQ DLRAKIFPLK GRKVKAPEPA RKKERSMSYL
201: VDVTKTKASD QAGRRRTKTV TRKELLQDSA SLAEKEEESL LKGHLLESTS SPNKFTQNKK DSDEPWDPES YWKPLNFLVE VANRTQTLKS SSASQGPGSK
301: SEKANASSHK QIQPRVKDHK SRYKREYEKS AKREMRDGPV WFSLVASTDQ DGDIPVSFIQ KYLMRKLNLQ SETEVEIRCM GEAVIPALKL QKLVDLWLHR
401: GSKRQKIDAW IGSSAQRIT
101: GGSGGIIHFH WSDIPTGDVY HHIVNVKGRV YVRKCIYEKI TEDEIECCPV CNIDLGGTPL DKLRPDHNLQ DLRAKIFPLK GRKVKAPEPA RKKERSMSYL
201: VDVTKTKASD QAGRRRTKTV TRKELLQDSA SLAEKEEESL LKGHLLESTS SPNKFTQNKK DSDEPWDPES YWKPLNFLVE VANRTQTLKS SSASQGPGSK
301: SEKANASSHK QIQPRVKDHK SRYKREYEKS AKREMRDGPV WFSLVASTDQ DGDIPVSFIQ KYLMRKLNLQ SETEVEIRCM GEAVIPALKL QKLVDLWLHR
401: GSKRQKIDAW IGSSAQRIT
001: MMIKVKKETM RACLSCSICD NILRDATTIS ECLHTFCRKC IYEKITEDEI ETCPVCNIDL GSTPLEKLRP DHNLQDLRAK IFALKRRKVK APGIVSLPGK
101: RKERSISSLV VSTPMVSAQA GTTRRRTKAP TRKELRNGSL AERTVKKEES SGDELLESTS SPDTLNKFTQ NKRQSKKSCK ESISNKENKD GDEPWDSKMD
201: WKPLNFLVEV ANGTKPLKSS ASQGSGSKSE HANVSRNQFQ GSKTKTKNKK RKCKREDDKS NNGDPTTSET VTPKRMRTTQ RKRSATTLGD SRNLPQPDES
301: SAKQERRNGP VWFSLVASND QEGGTSLPQI PANFLRIRDG NTTVSFIQKY LMRKLDLESE NEIEIKCMGE AVIPTLTLYN LVDLWLQKSS NHQRFAALVG
401: SSAKDFTMVL VYARKLPECN M
101: RKERSISSLV VSTPMVSAQA GTTRRRTKAP TRKELRNGSL AERTVKKEES SGDELLESTS SPDTLNKFTQ NKRQSKKSCK ESISNKENKD GDEPWDSKMD
201: WKPLNFLVEV ANGTKPLKSS ASQGSGSKSE HANVSRNQFQ GSKTKTKNKK RKCKREDDKS NNGDPTTSET VTPKRMRTTQ RKRSATTLGD SRNLPQPDES
301: SAKQERRNGP VWFSLVASND QEGGTSLPQI PANFLRIRDG NTTVSFIQKY LMRKLDLESE NEIEIKCMGE AVIPTLTLYN LVDLWLQKSS NHQRFAALVG
401: SSAKDFTMVL VYARKLPECN M
Arabidopsis Description
DRIP1E3 ubiquitin protein ligase DRIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Y4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.