Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G048200.1 | Wheat | plastid | 99.21 | 99.21 |
| TraesCS2D01G034400.1 | Wheat | plastid | 98.41 | 98.41 |
| Os01t0303000-02 | Rice | extracellular, plasma membrane, plastid | 71.43 | 72.58 |
| GSMUA_Achr8P10530_001 | Banana | plastid | 60.32 | 59.38 |
| GSMUA_Achr11P... | Banana | plastid | 58.73 | 57.36 |
| EER88061 | Sorghum | plastid | 54.76 | 53.49 |
| CDY25110 | Canola | plastid | 53.97 | 52.71 |
| Bra003499.1-P | Field mustard | plastid | 53.17 | 51.94 |
| CDX67892 | Canola | plastid | 52.38 | 51.16 |
| CDX76635 | Canola | plastid | 51.59 | 50.39 |
| CDY27491 | Canola | plastid | 49.21 | 49.6 |
| Bra007678.1-P | Field mustard | plastid | 50.79 | 49.23 |
| CDY11420 | Canola | plastid | 50.79 | 49.23 |
| CDY51422 | Canola | plastid | 47.62 | 48.39 |
| AT3G62410.1 | Thale cress | plastid | 50.0 | 48.09 |
| Bra004459.1-P | Field mustard | plastid | 48.41 | 48.03 |
| Bra000451.1-P | Field mustard | plastid | 47.62 | 47.62 |
| CDX83329 | Canola | plastid | 47.62 | 47.62 |
| CDX80101 | Canola | plastid | 47.62 | 47.62 |
| Bra021396.1-P | Field mustard | plastid | 46.83 | 47.58 |
| KRH31794 | Soybean | plastid | 48.41 | 47.29 |
| KRH69219 | Soybean | plastid | 47.62 | 46.88 |
| CDY55379 | Canola | plastid | 46.83 | 46.83 |
| CDX95723 | Canola | plastid | 46.83 | 46.83 |
| PGSC0003DMT400023336 | Potato | plastid | 46.03 | 46.77 |
| Solyc01g079470.2.1 | Tomato | plastid | 46.03 | 46.77 |
| AT2G47400.1 | Thale cress | plastid | 46.03 | 46.77 |
| Zm00001d044925_P001 | Maize | plastid | 50.79 | 45.71 |
| KRH68260 | Soybean | plastid | 47.62 | 45.45 |
| Solyc06g009630.1.1 | Tomato | plastid | 45.24 | 44.88 |
| TraesCS4A01G120600.1 | Wheat | plastid | 46.03 | 44.62 |
| PGSC0003DMT400018798 | Potato | cytosol | 42.06 | 42.06 |
| KRG96526 | Soybean | nucleus | 45.24 | 34.55 |
| VIT_01s0026g02480.t01 | Wine grape | extracellular | 46.83 | 29.95 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G035100.1 | EnsemblPlantsGene:TraesCS2A01G035100 | InterPro:DUF_CP12 | PANTHER:PTHR33921 | PANTHER:PTHR33921:SF9 | PFAM:PF02672 |
| SMART:SM01093 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:15269988..15270368
Molecular Weight (calculated)
13165.0 Da
IEP (calculated)
4.323
GRAVY (calculated)
-0.531
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MASALTNVSL STFAPTARGD VLARPQVAAA RVTFPTAHRG SGALSCRAGG PATPPGISDK MSDSIKEAQE TCSEDAASGE CAAAWDEVEE LSAAASHARD
101: KLKDSDPLEN YCKENPETDE CRTYDS
101: KLKDSDPLEN YCKENPETDE CRTYDS
001: MATIATGLNI ATQRVFVTSE NRPVCLAGPV HLNNSWNLGS RTTNRMMKLQ PIKAAPEGGI SDVVEKSIKE AQETCAGDPV SGECVAAWDE VEELSAAASH
101: ARDKKKADGS DPLEEYCKDN PETNECRTYD N
101: ARDKKKADGS DPLEEYCKDN PETNECRTYD N
Arabidopsis Description
CP12-2Calvin cycle protein CP12-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.