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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • plastid 4
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr2P15270_001
GSMUA_Achr3P13400_001
GSMUA_Achr3P25070_001
GSMUA_Achr7P14150_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G11090.1 GSMUA_Achr10P... AT4G01090.1 21798944
AT5G11090.1 GSMUA_Achr10P... AT4G01090.1 21798944
AT5G11090.1 GSMUA_Achr10P... AT4G01090.1 21798944
AT5G11090.1 GSMUA_Achr3P25070_001 AT4G01090.1 21798944
AT5G11090.1 GSMUA_Achr7P14150_001 AT4G01090.1 21798944
AT5G11090.1 GSMUA_AchrUn_... AT4G24840.1 21798944
AT5G11090.1 GSMUA_Achr3P13400_001 AT4G31920.1 18642946
AT5G11090.1 GSMUA_Achr2P15270_001 AT5G53060.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88167 Canola plastid 31.25 38.04
CDY19808 Canola plastid 31.7 36.79
Bra036540.1-P Field mustard plastid 31.25 36.65
KRH15826 Soybean plastid 31.7 36.22
CDX97080 Canola mitochondrion, plastid 31.7 35.86
Bra028552.1-P Field mustard mitochondrion, plastid 30.36 35.79
Bra009829.1-P Field mustard plastid 33.04 35.75
CDX69786 Canola mitochondrion, plastid 30.8 35.57
GSMUA_AchrUn_... Banana mitochondrion, plastid 30.36 35.23
CDX87091 Canola plastid 30.8 35.2
Bra008991.1-P Field mustard nucleus, plastid 34.38 35.16
Solyc03g117290.1.1 Tomato mitochondrion, plastid 23.21 35.14
AT5G11090.1 Thale cress plastid 33.93 35.02
CDX80497 Canola plastid 32.14 34.95
KRH52394 Soybean plastid 33.48 34.88
AT5G25280.3 Thale cress plastid 33.93 34.55
Bra006088.1-P Field mustard plastid 33.04 34.1
VIT_09s0002g08540.t01 Wine grape plastid 30.36 33.83
CDX78410 Canola mitochondrion, plastid 33.04 33.33
KRH05207 Soybean plastid 29.91 32.84
PGSC0003DMT400073335 Potato plastid 27.68 32.8
CDX70380 Canola mitochondrion, plastid 32.14 32.58
GSMUA_Achr5P23430_001 Banana plastid 26.79 32.43
PGSC0003DMT400096763 Potato plastid 28.12 31.34
Solyc06g068330.1.1 Tomato plastid 27.23 30.96
CDY51107 Canola plastid 29.02 28.51
CDX85730 Canola plastid 29.46 28.33
GSMUA_Achr6P02840_001 Banana mitochondrion, plastid 32.14 27.38
KRH61721 Soybean plastid 31.7 26.59
Protein Annotations
EnsemblPlants:GSMUA_Achr1P09980_001EnsemblPlants:GSMUA_Achr1T09980_001EnsemblPlantsGene:GSMUA_Achr1G09980_001PANTHER:PTHR33132PANTHER:PTHR33132:SF12SEG:seg
UniParc:UPI0002950BB4UniProt:M0RYK7MapMan:35.2:::
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G09980_001]
Coordinates
chr1:+:7605863..7606537
Molecular Weight (calculated)
22999.1 Da
IEP (calculated)
12.264
GRAVY (calculated)
-0.405
Length
224 amino acids
Sequence
(BLAST)
001: MAATSYRGRY GGGRDHTHSS SLRRSISPSG ALRCSSASAF ASSSASAFAS SSPCSSALLH RSASLIRVIF AGPSPSPRSV RFAVASFHGN HSQKKPAKRP
101: VVGSSDGGGR RRMCMCSPTT HPGSFRCRLH KGIGGRATAV ASSSSSLCIR LNARPSAMTN SLVRWRASGC GGLSPPSTVP PPTSSGATPP SSPDPAASPS
201: CPRPATTIPD DRRSPISKQI PGRS
Best Arabidopsis Sequence Match ( AT5G25280.2 )
(BLAST)
001: MAITSSRTTR SNGSASLRSK SPSGRFCGVY SNRMPSSSPS SSGFASSTSS SFSSPSTAFF SSHNQNNHHQ HRSASPTRVN LFTSAPMTQS FRYSIDNRSI
101: SPNRSIAVSS NKPSNHHKIP DSRRRCMCSP TTHPGSFRCS LHKNVANPHG QGTASYTTNG LNMRRSAMTN SLVRIGGVEG EWVRRALTTL IRPSSHQLKR
201: RSAYEPRRSR LASMSKAEDL
Arabidopsis Description
AT5g25280/F18G18_20 [Source:UniProtKB/TrEMBL;Acc:Q93WB2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.