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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 4
  • cytosol 2
  • mitochondrion 1
  • nucleus 3
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69786 Canola mitochondrion, plastid 77.17 87.11
CDX97080 Canola mitochondrion, plastid 76.26 84.34
Bra006088.1-P Field mustard plastid 80.82 81.57
Bra028552.1-P Field mustard mitochondrion, plastid 68.04 78.42
Bra009829.1-P Field mustard plastid 68.04 71.98
Bra036540.1-P Field mustard plastid 60.73 69.63
KRH52394 Soybean plastid 61.19 62.33
Solyc03g117290.1.1 Tomato mitochondrion, plastid 40.18 59.46
KRH15826 Soybean plastid 52.05 58.16
PGSC0003DMT400073335 Potato plastid 46.12 53.44
KRH05207 Soybean plastid 49.32 52.94
Solyc06g068330.1.1 Tomato plastid 45.66 50.76
PGSC0003DMT400096763 Potato plastid 46.58 50.75
VIT_09s0002g08540.t01 Wine grape plastid 46.12 50.25
KRH61721 Soybean plastid 58.45 47.94
Bra020102.1-P Field mustard plastid 26.03 37.25
GSMUA_Achr1P09980_001 Banana plastid 35.16 34.38
Bra006558.1-P Field mustard plastid 25.57 33.53
Bra002297.1-P Field mustard plastid 22.37 27.68
Protein Annotations
EnsemblPlants:Bra008991.1EnsemblPlants:Bra008991.1-PEnsemblPlantsGene:Bra008991PANTHER:PTHR33132PANTHER:PTHR33132:SF12SEG:seg
UniParc:UPI0002544308UniProt:M4CXP4MapMan:35.2:::
Description
AT5G25280 (E=1e-062) | serine-rich protein-related
Coordinates
chrA10:-:14753077..14753736
Molecular Weight (calculated)
24081.0 Da
IEP (calculated)
12.111
GRAVY (calculated)
-0.860
Length
219 amino acids
Sequence
(BLAST)
001: MVTTSSRTKS NGHVLRSQSP SGRFCGDYSK STPSSSSSTF ASSTSSSFSS PSSSFFSNHH RSASPTRVNL YNPQPIAQSF RYSLDSRSIS PTNRSISVTK
101: KPQPSSHHHH HHHKISSSPR RCMCSPTTHP GSFRCSLHKN VANPHGQGAS SSSYPTNSLN MRRSAMTNSL VRIGGVEGEW VRRALTTLIR PSSHHLRRRA
201: AYQPRPSRLS NMSKATECN
Best Arabidopsis Sequence Match ( AT5G11090.1 )
(BLAST)
001: MVTTSSRTKS NGPVLRSQSP SGRFCGGYSR AVPSSSSSAF ASSTSSSFSS PSSAFFSNHR HHESNHSHHR SASPTRVNLY TAQPMSQSFR YSLDSRSISP
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
Arabidopsis Description
At5g11090 [Source:UniProtKB/TrEMBL;Acc:Q9FY56]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.