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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 2
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92466 Canola plastid 93.79 93.79
Bra006558.1-P Field mustard plastid 42.37 44.91
Bra020102.1-P Field mustard plastid 36.72 42.48
AT5G20370.1 Thale cress mitochondrion 37.85 38.29
KRH03578 Soybean nucleus, plastid 17.51 30.39
PGSC0003DMT400079003 Potato plastid 15.82 28.0
VIT_11s0118g00580.t01 Wine grape plastid 15.82 26.92
KRH20233 Soybean plastid 16.38 26.85
Bra028552.1-P Field mustard mitochondrion, plastid 25.42 23.68
Bra036540.1-P Field mustard plastid 25.42 23.56
KRH37829 Soybean plastid 16.38 22.83
Bra008991.1-P Field mustard nucleus, plastid 27.68 22.37
Bra009829.1-P Field mustard plastid 25.42 21.74
Os08t0167249-00 Rice plastid 21.47 21.71
Bra006088.1-P Field mustard plastid 25.99 21.2
Zm00001d024494_P001 Maize plastid 19.21 19.88
KXG24525 Sorghum plastid 18.64 18.54
Protein Annotations
EnsemblPlants:Bra002297.1EnsemblPlants:Bra002297.1-PEnsemblPlantsGene:Bra002297SEG:segUniParc:UPI0002544C1FUniProt:M4CDL6
MapMan:35.2:::::
Description
AT5G20370 (E=2e-009) | serine-rich protein-related
Coordinates
chrA10:+:10426020..10426553
Molecular Weight (calculated)
19581.9 Da
IEP (calculated)
12.197
GRAVY (calculated)
-0.719
Length
177 amino acids
Sequence
(BLAST)
001: MAATGRSSAS SVLRPLSPSD KINLRLKRLS TATAVPRKRK CRCSPTSSTH TGPSRCSIHR RLEIVKLLTL KPKRRRSTSI ATTSSSSSSG SNEKKIGTLG
101: LKARRRRSGG ITTSDSGLNL RKTALVNSLA GLGTVEAERC RKYLKESMAK PLSLRFRCKY RPRPRPSRFY ALHKDQD
Best Arabidopsis Sequence Match ( AT5G20370.1 )
(BLAST)
001: MAATGRSSRS VLRPLSSSQR LHNNHHHHHR QRSPSPCNKN LNLRLKFYSP GSIPKPSVVT VSSNHQTKRK CLCSPTTHPG SFRCSFHRRL EHEKSKTLAS
101: STVKRNNRGD NTIRVNVGLN LRKLALMNSL AKIGSVEAER FRRSLAANLA KPSSLHSHRR PEFRPRLSRF HEDQD
Arabidopsis Description
Serine-rich protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q3E9A1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.