Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 7
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400079003 | Potato | plastid | 56.73 | 59.0 |
| KRH20233 | Soybean | plastid | 48.08 | 46.3 |
| KRH03578 | Soybean | nucleus, plastid | 43.27 | 44.12 |
| KRH37829 | Soybean | plastid | 45.19 | 37.01 |
| CDX70925 | Canola | plastid | 32.69 | 23.29 |
| Os08t0167249-00 | Rice | plastid | 36.54 | 21.71 |
| Bra020102.1-P | Field mustard | plastid | 31.73 | 21.57 |
| CDY45090 | Canola | plastid | 31.73 | 21.57 |
| CDY68410 | Canola | plastid | 31.73 | 21.57 |
| Bra006558.1-P | Field mustard | plastid | 34.62 | 21.56 |
| CDY51848 | Canola | plastid | 32.69 | 20.36 |
| VIT_09s0002g08540.t01 | Wine grape | plastid | 37.5 | 19.4 |
| Zm00001d024494_P001 | Maize | plastid | 31.73 | 19.3 |
| VIT_11s0118g00570.t01 | Wine grape | plastid | 36.54 | 18.91 |
| AT5G20370.1 | Thale cress | mitochondrion | 31.73 | 18.86 |
| VIT_04s0008g06250.t01 | Wine grape | plastid | 36.54 | 18.36 |
| KXG24525 | Sorghum | plastid | 29.81 | 17.42 |
| CDX92466 | Canola | plastid | 26.92 | 15.82 |
| Bra002297.1-P | Field mustard | plastid | 26.92 | 15.82 |
| CDY56862 | Canola | plastid | 25.96 | 14.29 |
Protein Annotations
| ArrayExpress:VIT_11s0118g00580 | EMBL:FN595515 | EnsemblPlants:VIT_11s0118g00580.t01 | EnsemblPlantsGene:VIT_11s0118g00580 | PANTHER:PTHR33132 | PANTHER:PTHR33132:SF28 |
| ProteinID:CCB49928 | ProteinID:CCB49928.1 | UniParc:UPI0002108D69 | UniProt:F6HCI2 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr11:-:6362300..6362866
Molecular Weight (calculated)
11578.0 Da
IEP (calculated)
11.946
GRAVY (calculated)
-0.599
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGPPNSKP HPATRPCLCS PTTHPGSFRC SLHRNFDRVP SGALVRPSSR QWQLEVMAKA NSVKAFLLQI IKPSSHDLQR RRNFKPKPTR FCLMNGNRDG
101: VAVS
101: VAVS
001: MVTTSSRTKS NGPVLRSQSP SGRFCGGYSR AVPSSSSSAF ASSTSSSFSS PSSAFFSNHR HHESNHSHHR SASPTRVNLY TAQPMSQSFR YSLDSRSISP
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
Arabidopsis Description
At5g11090 [Source:UniProtKB/TrEMBL;Acc:Q9FY56]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.