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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45090 Canola plastid 96.73 96.73
CDX70925 Canola plastid 45.75 47.95
CDY51848 Canola plastid 50.33 46.11
AT5G20370.1 Thale cress mitochondrion 48.37 42.29
CDX92466 Canola plastid 43.79 37.85
PGSC0003DMT400079003 Potato plastid 22.88 35.0
KRH03578 Soybean nucleus, plastid 22.88 34.31
CDY56862 Canola plastid 41.83 33.86
VIT_11s0118g00580.t01 Wine grape plastid 21.57 31.73
KRH20233 Soybean plastid 21.57 30.56
CDX88167 Canola plastid 35.95 29.89
CDY19808 Canola plastid 36.6 29.02
CDX80497 Canola plastid 38.56 28.64
KRH37829 Soybean plastid 22.88 27.56
CDX87091 Canola plastid 35.29 27.55
Os08t0167249-00 Rice plastid 31.37 27.43
CDX78410 Canola mitochondrion, plastid 38.56 26.58
CDX70380 Canola mitochondrion, plastid 37.25 25.79
CDX69786 Canola mitochondrion, plastid 32.68 25.77
CDX97080 Canola mitochondrion, plastid 33.33 25.76
CDY51107 Canola plastid 37.25 25.0
CDX85730 Canola plastid 37.25 24.46
Zm00001d024494_P001 Maize plastid 25.49 22.81
KXG24525 Sorghum plastid 26.14 22.47
Protein Annotations
EnsemblPlants:CDY68410EnsemblPlantsGene:GSBRNA2T00074166001PANTHER:PTHR33132PANTHER:PTHR33132:SF28ProteinID:CDY68410ProteinID:CDY68410.1
SEG:segUniParc:UPI0004EEF346UniProt:A0A078JPN6MapMan:35.2::
Description
BnaAnng27180DBnaAnng27180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JPN6]
Coordinates
chrLK037291:+:1828..2289
Molecular Weight (calculated)
17278.7 Da
IEP (calculated)
11.771
GRAVY (calculated)
-0.795
Length
153 amino acids
Sequence
(BLAST)
001: MAATGRRSNG SSVLYPHSSS HRHQRSASPC NNINLRLKRF SLGNNPPSSS AVRKCSCSPT THPGSFRCGF HRRLENEKSK ALSNKSKSGD SGLYLRKLAL
101: VNSLARIGSV EAERFRKYLT ESIVKPSSLL IRRRFEFRPR LSRFYGMHKD PKD
Best Arabidopsis Sequence Match ( AT5G20370.1 )
(BLAST)
001: MAATGRSSRS VLRPLSSSQR LHNNHHHHHR QRSPSPCNKN LNLRLKFYSP GSIPKPSVVT VSSNHQTKRK CLCSPTTHPG SFRCSFHRRL EHEKSKTLAS
101: STVKRNNRGD NTIRVNVGLN LRKLALMNSL AKIGSVEAER FRRSLAANLA KPSSLHSHRR PEFRPRLSRF HEDQD
Arabidopsis Description
Serine-rich protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q3E9A1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.