Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036540.1-P | Field mustard | plastid | 92.75 | 93.72 |
| CDX87091 | Canola | plastid | 81.35 | 80.1 |
| CDX88167 | Canola | plastid | 68.39 | 71.74 |
| CDX80497 | Canola | plastid | 73.58 | 68.93 |
| AT5G25280.3 | Thale cress | plastid | 75.13 | 65.91 |
| CDX69786 | Canola | mitochondrion, plastid | 63.21 | 62.89 |
| CDX97080 | Canola | mitochondrion, plastid | 63.21 | 61.62 |
| CDX78410 | Canola | mitochondrion, plastid | 68.91 | 59.91 |
| CDX70380 | Canola | mitochondrion, plastid | 66.84 | 58.37 |
| KRH52394 | Soybean | plastid | 63.21 | 56.74 |
| Solyc03g117290.1.1 | Tomato | mitochondrion, plastid | 42.49 | 55.41 |
| CDX85730 | Canola | plastid | 62.18 | 51.5 |
| CDY51107 | Canola | plastid | 60.1 | 50.88 |
| KRH05207 | Soybean | plastid | 52.85 | 50.0 |
| KRH15826 | Soybean | plastid | 50.78 | 50.0 |
| PGSC0003DMT400073335 | Potato | plastid | 48.19 | 49.21 |
| VIT_09s0002g08540.t01 | Wine grape | plastid | 49.74 | 47.76 |
| Solyc06g068330.1.1 | Tomato | plastid | 47.15 | 46.19 |
| PGSC0003DMT400096763 | Potato | plastid | 47.15 | 45.27 |
| KRH61721 | Soybean | plastid | 57.51 | 41.57 |
| CDY68410 | Canola | plastid | 29.02 | 36.6 |
| CDY45090 | Canola | plastid | 28.5 | 35.95 |
| CDX70925 | Canola | plastid | 26.42 | 34.93 |
| GSMUA_Achr1P09980_001 | Banana | plastid | 36.79 | 31.7 |
| CDY51848 | Canola | plastid | 26.42 | 30.54 |
| CDX92466 | Canola | plastid | 23.32 | 25.42 |
| CDY56862 | Canola | plastid | 22.28 | 22.75 |
Protein Annotations
| EnsemblPlants:CDY19808 | EnsemblPlantsGene:GSBRNA2T00009565001 | PANTHER:PTHR33132 | PANTHER:PTHR33132:SF12 | ProteinID:CDY19808 | ProteinID:CDY19808.1 |
| SEG:seg | UniParc:UPI0000EC7D6F | UniProt:A0A078G506 | MapMan:35.2 | : | : |
Description
BnaA09g04610DBnaA09g04610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G506]
Coordinates
chrLK032100:-:468744..470415
Molecular Weight (calculated)
21046.7 Da
IEP (calculated)
12.355
GRAVY (calculated)
-0.704
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVTSSRTRS TASALRSPSS PGFASSTSST FSSRTFFSNQ HHQHQPHRSA SPTRVNLFAS SPLKQSSFRY SIDNTRSIAV SKPSGGNKIP DSRRRCMCSP
101: TTHPGSFRCS LHKNVANPHG QGAATAAAYP TNSLNMRRSA MTNSLVRIGG VEGEWVRRAL TTLIRPSSHQ LKRRSAYQPR PSRLSSMSKA DDL
101: TTHPGSFRCS LHKNVANPHG QGAATAAAYP TNSLNMRRSA MTNSLVRIGG VEGEWVRRAL TTLIRPSSHQ LKRRSAYQPR PSRLSSMSKA DDL
001: MAITSSRTTR SNGSASLRSK SPSGRFCGVY SNRMPSSSPS SSGFASSTSS SFSSPSTAFF SSHNQNNHHQ HRSASPTRVN LFTSAPMTQS FRYSIDNRSI
101: SPNRSIAVSS NKPSNHHKIP DSRRRCMCSP TTHPGSFRCS LHKNVANPHG QGTASYTTNG LNMRRSAMTN SLVRIGGVEG EWVRRALTTL IRPSSHQLKR
201: RSAYEPRRSR LASMSKAEDL
101: SPNRSIAVSS NKPSNHHKIP DSRRRCMCSP TTHPGSFRCS LHKNVANPHG QGTASYTTNG LNMRRSAMTN SLVRIGGVEG EWVRRALTTL IRPSSHQLKR
201: RSAYEPRRSR LASMSKAEDL
Arabidopsis Description
AT5g25280/F18G18_20 [Source:UniProtKB/TrEMBL;Acc:Q93WB2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.